RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 SGK1O00141 431 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 APOL1O14791 398 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 MDM4O15151 490 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZSCAN9O15535 394 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ATP8B1O43520 1251 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 CST8O60676 142 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 CNOT3O75175 753 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 BEST1O76090 585 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 BAIAP3O94812 1187 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRUB2O95900 331 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 SYF2O95926 243 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TIMP1P01033 207 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 MBPP02686 304 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 URODP06132 367 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 GALTP07902 379 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 KRT10P13645 584 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TCF4P15884 667 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 KDELR1P24390 212 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ACTN2P35609 894 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 COILP38432 576 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PBX3P40426 434 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 MATKP42679 507 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 GSTM5P46439 218 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ALDH7A1P49419 539 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 YWHAZP63104 245 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 NME3Q13232 169 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PPIGQ13427 754 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 FHL3Q13643 280 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PTK6Q13882 451 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 BTG3Q14201 252 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 CASP8Q14790 479 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PDK2Q15119 407 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TWIST1Q15672 202 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PSMD5Q16401 504 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TCTN1Q2MV58 587 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ARL13BQ3SXY8 428 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC25A52Q3SY17 297 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 LEXMQ3ZCV2 418 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCDC14Q49A88 953 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 BOLA3Q53S33 107 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSP90B2PQ58FF3 399 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 DCAF6Q58WW2 860 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PPP6R3Q5H9R7 873 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TMEM196Q5HYL7 178 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 KCNT1Q5JUK3 1230 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TXNRD3NBQ6F5E7 133 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRNP1Q6NT89 227 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM171BQ6P995 826 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 EMBQ6PCB8 327 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 MFSD7Q6UXD7 560 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 CD300LGQ6UXG3 332 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PAQR9Q6ZVX9 377 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ARCQ7LC44 396 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM131BQ86XD5 332 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 UEVLDQ8IX04 471 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 MMP21Q8N119 569 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 KRT78Q8N1N4 520 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ARHGAP18Q8N392 663 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PRELID2Q8N945 189 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCDC89Q8N998 374 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 BBOF1Q8ND07 529 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 SPPL2BQ8TCT7 592 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 RNF139Q8WU17 664 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 C2orf15Q8WU43 125 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 HDAC7Q8WUI4 952 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 C1orf54Q8WWF1 131 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 IRGQQ8WZA9 623 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 AKAP1Q92667 903 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRRC45Q96CN5 670 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 GRAMD1AQ96CP6 724 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 SNF8Q96H20 258 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PGLYRP2Q96PD5 576 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PEBP4Q96S96 227 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 YME1L1Q96TA2 773 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 TBCBQ99426 244 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 FMO2Q99518 471 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 SEPT5Q99719 369 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 RTP3Q9BQQ7 232 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZNF670Q9BS34 389 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 DDX23Q9BUQ8 820 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 HERC2P3Q9BVR0 1158 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 FRMD8P1Q9BZ68 369 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM234AQ9H0X4 552 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 MTIF3Q9H2K0 278 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 FBXO44Q9H4M3 255 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 DHX35Q9H5Z1 703 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 POPDC2Q9HBU9 364 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 GDF3Q9NR23 364 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 GPATCH2LQ9NWQ4 482 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 DDIT4Q9NX09 232 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 RRN3Q9NYV6 651 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 PCYOX1Q9UHG3 505 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 NFU1Q9UMS0 254 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZNF148Q9UQR1 794 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 HELZP42694 1942 aaKnown RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 SHROOM3Q8TF72 1996 aa3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 MTMR11A4FU01 709 aa3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 C16orf96A6NNT2 1141 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms