RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 TRIM38O00635 465 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 LIN7AO14910 233 aaPredicted RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 KHNYNO15037 678 aaKnown RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 YY2O15391 372 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 AQP9O43315 295 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 SLCO2B1O94956 709 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 LMNAP02545 664 aaKnown RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 MYZAPP0CAP1 466 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CCDC166P0CW27 439 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CD1DP15813 335 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 KRT4P19013 534 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CD9P21926 228 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 TGM1P22735 817 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CNTFP26441 200 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 ACADLP28330 430 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CRABP2P29373 138 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 RXRGP48443 463 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.152e-10■■■■□ 19.4
MDC1-203ENST00000417033 KCNC4Q03721 635 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 ABRQ12979 859 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 OR4D1Q15615 310 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 TSNQ15631 228 aaKnown RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 PHKG1Q16816 387 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 TAF1BQ53T94 588 aaPredicted RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 PLEKHS1Q5SXH7 462 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 MBOAT1Q6ZNC8 495 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 ASCL5Q7RTU5 278 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CLEC14AQ86T13 490 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 PDZD3Q86UT5 571 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 EXOC3L1Q86VI1 746 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 RASGRP3Q8IV61 690 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 SLC22A15Q8IZD6 547 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 NAGSQ8N159 534 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 MINDY1Q8N5J2 469 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 KYQ8NBH2 561 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 PHC3Q8NDX5 983 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CEP76Q8TAP6 659 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 SKA2Q8WVK7 121 aaPredicted RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 EXT2Q93063 718 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 TMEM159Q96B96 161 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 SKA1Q96BD8 255 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 MTBPQ96DY7 904 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 TSPAN17Q96FV3 270 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 PGM2Q96G03 612 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 UBXN10Q96LJ8 280 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 TSSK1BQ9BXA7 367 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 NUSAP1Q9BXS6 441 aaKnown RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 GSDMCQ9BYG8 508 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 ERVMER34-1Q9H9K5 563 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 POPDC3Q9HBV1 291 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 TMEM216Q9P0N5 145 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 SLC17A7Q9P2U7 560 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 NCDNQ9UBB6 729 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 SPASTQ9UBP0 616 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 EMCNQ9ULC0 261 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 PLAGL1Q9UM63 463 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 BTBD3Q9Y2F9 522 aa7.88□□□□□ -1.15
MDC1-203ENST00000417033 DNMT3AQ9Y6K1 912 aaPredicted RBP7.88□□□□□ -1.15
MDC1-203ENST00000417033 ARHGEF17Q96PE2 2063 aaPredicted RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 A0A087X1B8 175 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 BTN3A1O00481 513 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 CDX4O14627 284 aaPredicted RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 CASC3O15234 703 aaKnown RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 GDF9O60383 454 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 NOBOXO60393 691 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 MPOP05164 745 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 LTA4HP09960 611 aaKnown RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 SBK3P0C264 359 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 SLC35G4P0C7Q5 338 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 ZNF806P0C7X5 589 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 TPBGLP0DKB5 382 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 TFEBP19484 476 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 IDSP22304 550 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 DPP6P42658 865 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 KCNC1P48547 511 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 CCT8P50990 548 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 BLKP51451 505 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 IL2P60568 153 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 MAGOHP61326 146 aaKnown RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 NHLH1Q02575 133 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 SLC18A2Q05940 514 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 DNAJC3Q13217 504 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 LRP8Q14114 963 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 MPP2Q14168 576 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 RPE65Q16518 533 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 C18orf21Q32NC0 220 aaPredicted RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 UAP1L1Q3KQV9 507 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 TTLL9Q3SXZ7 439 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 FBXO48Q5FWF7 155 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 TECRLQ5HYJ1 363 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 LGSNQ5TDP6 509 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 AGBL2Q5U5Z8 902 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 CAPRIN2Q6IMN6 1127 aaKnown RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 UGT3A1Q6NUS8 523 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 RABEPKQ7Z6M1 372 aa7.87□□□□□ -1.15
MDC1-203ENST00000417033 TBC1D1Q86TI0 1168 aaPredicted RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 ZNF761Q86XN6 746 aaPredicted RBP7.87□□□□□ -1.15
MDC1-203ENST00000417033 MYO1HQ8N1T3 1032 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms