RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 PRSS55Q6UWB4 352 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 STK32CQ86UX6 486 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ZSWIM9Q86XI8 627 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 SPATA17Q96L03 361 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CINPQ9BW66 212 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 SEPT3Q9UH03 358 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 MAGEL2Q9UJ55 1249 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 HELZP42694 1942 aaKnown RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 SLC38A8A6NNN8 435 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 COCHO43405 550 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ABCB7O75027 752 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CRCPO75575 148 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 PRKD3O94806 890 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 NPPAP01160 153 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CTPS1P17812 591 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 GKP32189 559 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 LAPTM4AQ15012 233 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 PON2Q15165 354 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 NFE2Q16621 373 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 FAM174BQ3ZCQ3 159 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 RUNDC3AQ59EK9 446 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 C6orf141Q5SZD1 244 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ATXN7L2Q5T6C5 722 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 CENPSQ8N2Z9 138 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CLHC1Q8NHS4 586 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ITFG1Q8TB96 612 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 OSCP1Q8WVF1 389 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 FIG4Q92562 907 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 MUL1Q969V5 352 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 PDLIM5Q96HC4 596 aaKnown RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 INPP5KQ9BT40 448 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 YTHDF1Q9BYJ9 559 aaKnown RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 IPPKQ9H8X2 491 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 GPN2Q9H9Y4 310 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 TRMT6Q9UJA5 497 aaKnown RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 DLGAP4Q9Y2H0 992 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 OR51B4Q9Y5P0 310 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 COL4A6Q14031 1691 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 F5H5T6 163 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 FFAR2O15552 330 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 MAN1A2O60476 641 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 BCAS1O75363 584 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 EPHA2P29317 976 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 TGFBR1P36897 503 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 OPRL1P41146 370 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 TMBIM6P55061 237 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ESRRGP62508 458 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 FKBP1BP68106 108 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CARD16Q5EG05 197 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 DNAJC14Q6Y2X3 702 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 IGFN1Q86VF2 1251 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CYP4Z1Q86W10 505 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 IFNL1Q8IU54 200 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CRIPAKQ8N1N5 446 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 OR8J3Q8NGG0 315 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 C17orf80Q9BSJ5 609 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 FEM1AQ9BSK4 669 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 VN1R3Q9BXE9 311 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 C8orf4Q9NR00 106 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 PPT2Q9UMR5 302 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 PCDHB14Q9Y5E9 798 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 DGKBQ9Y6T7 804 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 FUOMA2VDF0 154 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CBX4O00257 560 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 NRG2O14511 850 aaPredicted RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 GREM1O60565 184 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 VPS26AO75436 327 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 STC2O76061 302 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 GUCA1CO95843 209 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 RPL17P18621 184 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 TACR1P25103 407 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 GSTM2P28161 218 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 DCTP40126 519 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 SLC11A1P49279 550 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 RPL38P63173 70 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 CYP4F3Q08477 520 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CBX3Q13185 183 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 NR6A1Q15406 480 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 USP39Q53GS9 565 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 GALNT18Q6P9A2 607 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CEP68Q76N32 757 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CCDC71Q8IV32 467 aaPredicted RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 CROCCP3Q8IVE0 287 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 RBM12BQ8IXT5 1001 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 CNIH3Q8TBE1 160 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 PIH1D2Q8WWB5 315 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 THAP11Q96EK4 314 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 ALG14Q96F25 216 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CASD1Q96PB1 797 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 HHIPQ96QV1 700 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 TBCDQ9BTW9 1192 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 BDH2Q9BUT1 245 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 TTLL2Q9BWV7 592 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CLMPQ9H6B4 373 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 KAT8Q9H7Z6 458 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 TBCCD1Q9NVR7 557 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 NUDT4Q9NZJ9 180 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms