RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 RAB11FIP5Q9BXF6 653 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 POLR1BQ9H9Y6 1135 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 RDH14Q9HBH5 336 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 FBXO6Q9NRD1 293 aaPredicted RBP14.28□□□□□ -0.12
LIMS1-206ENST00000414829 LATS2Q9NRM7 1088 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 TAS2R13Q9NYV9 303 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 IL1RAPL1Q9NZN1 696 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 DKK4Q9UBT3 224 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 EPHA6Q9UF33 1036 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 SLC24A2Q9UI40 661 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 ENTPD2Q9Y5L3 495 aa14.28□□□□□ -0.12
LIMS1-206ENST00000414829 MYLKQ15746 1914 aa14.27□□□□□ -0.12
LIMS1-206ENST00000414829 BPTFQ12830 3046 aa14.27□□□□□ -0.12
LIMS1-206ENST00000414829 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 ANKRD34CP0C6C1 535 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 THRAP10827 490 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 ITGB6P18564 788 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 ACADLP28330 430 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 CSTF2P33240 577 aaKnown RBP eCLIP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 SHMT2P34897 504 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 LSSP48449 732 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 RGS4P49798 205 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 PDX1P52945 283 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 LIMK2P53671 638 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 NAB1Q13506 487 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 FASTKD3Q14CZ7 662 aaKnown RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 BRD3Q15059 726 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 TEDDM1Q5T9Z0 273 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 IGF2-ASQ6U949 168 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 ZDHHC24Q6UX98 284 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 NEK10Q6ZWH5 1172 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 USP53Q70EK8 1073 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 IGDCC3Q8IVU1 814 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 IFT20Q8IY31 132 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 KRT222Q8N1A0 295 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 LILRA3Q8N6C8 439 aaPredicted RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 AGBL5Q8NDL9 886 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 SKA2Q8WVK7 121 aaPredicted RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 LCN9Q8WX39 176 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 GATA6Q92908 595 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 PWWP2AQ96N64 755 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 FMO2Q99518 471 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 WDR83Q9BRX9 315 aaKnown RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 TBC1D10AQ9BXI6 508 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 SRMSQ9H3Y6 488 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 TFB2MQ9H5Q4 396 aaKnown RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 L2HGDHQ9H9P8 463 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 MOCS1Q9NZB8 636 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 PDP2Q9P2J9 529 aa14.27□□□□□ -0.13
LIMS1-206ENST00000414829 TRMT6Q9UJA5 497 aaKnown RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 ATXN7L1Q9ULK2 861 aaPredicted RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 CFAP20Q9Y6A4 193 aaKnown RBP14.27□□□□□ -0.13
LIMS1-206ENST00000414829 IGHV5-10-1A0A0J9YXX1 117 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 ESYT3A0FGR9 886 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 IQCF5A8MTL0 148 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 BHMG1C9JSJ3 638 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-206ENST00000414829 PLD2O14939 933 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 NIPSNAP2O75323 286 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 DXOO77932 396 aaKnown RBP14.26□□□□□ -0.13
LIMS1-206ENST00000414829 JMJD7P0C870 316 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 CD9P21926 228 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 RBMS1P29558 406 aaKnown RBP14.26□□□□□ -0.13
LIMS1-206ENST00000414829 PDHA2P29803 388 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 CSF2RBP32927 897 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 PHBP35232 272 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 CARSP49589 748 aaKnown RBP14.26□□□□□ -0.13
LIMS1-206ENST00000414829 GABREP78334 506 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 CAMK2BQ13554 666 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 HP1BP3Q5SSJ5 553 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-206ENST00000414829 NKAIN2Q5VXU1 208 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 FAM45BPQ6NSW5 357 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 XKR5Q6UX68 686 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 MICALCLQ6ZW33 695 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 RAB11FIP2Q7L804 512 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 RELL1Q8IUW5 271 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 FAM45AQ8TCE6 357 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 ATXN7L3BQ96GX2 97 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 CCDC74BQ96LY2 380 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 AARSD1Q9BTE6 412 aaKnown RBP14.26□□□□□ -0.13
LIMS1-206ENST00000414829 HGH1Q9BTY7 390 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 B3GNT4Q9C0J1 378 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 CCDC86Q9H6F5 360 aaKnown RBP14.26□□□□□ -0.13
LIMS1-206ENST00000414829 THSD1Q9NS62 852 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 ZDHHC18Q9NUE0 388 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 OR6C2Q9NZP2 312 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 AK5Q9Y6K8 562 aa14.26□□□□□ -0.13
LIMS1-206ENST00000414829 PLXNB3Q9ULL4 1909 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 OR5K3A6NET4 321 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 TRABD2BA6NFA1 517 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 ESPNB1AK53 854 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 MAP3K7O43318 606 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 C9P02748 559 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 ITGA2BP08514 1039 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 MAGEA4P43358 317 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 CLDN6P56747 220 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 RAB15P59190 212 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 ERVPABLB-1P60509 514 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 MPP1Q00013 466 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 GBX1Q14549 363 aa14.25□□□□□ -0.13
LIMS1-206ENST00000414829 TMEM164Q5U3C3 297 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms