RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HSPA9P38646 679 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 HALP42357 657 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ATP5OP48047 213 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PEX5P50542 639 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CCT8P50990 548 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 HK3P52790 923 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 RWDD2BP57060 319 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 IFI35P80217 286 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 OTUD4Q01804 1114 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 CD69Q07108 199 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 NSUN2Q08J23 767 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS41-205ENST00000414632 ELP6Q0PNE2 266 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 OLIG2Q13516 323 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 HNRNPDQ14103 355 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 PDE1CQ14123 709 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 TFDP2Q14188 446 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PDK1Q15118 436 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PRKD1Q15139 912 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 SHBQ15464 509 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CNGA3Q16281 694 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TMEM95Q3KNT9 176 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TMEM52BQ4KMG9 183 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 SLC45A4Q5BKX6 768 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ARMC12Q5T9G4 340 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 NEK5Q6P3R8 708 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 BRAT1Q6PJG6 821 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 Q6ZSR6 202 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 RFLNAQ6ZTI6 216 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 DPPA4Q7L190 304 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 HSD11B1LQ7Z5J1 315 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 RCOR2Q8IZ40 523 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 SYCE1Q8N0S2 351 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 RBFAQ8N0V3 343 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PELI3Q8N2H9 469 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 EID2Q8N6I1 236 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 UBL4BQ8N7F7 174 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 STPG3Q8N7X2 389 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TP53I13Q8NBR0 393 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 PLA2G15Q8NCC3 412 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CCDC112Q8NEF3 446 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 LPCAT1Q8NF37 534 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 SPATA22Q8NHS9 363 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PPP1R14CQ8TAE6 165 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ARRDC2Q8TBH0 407 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ACTL9Q8TC94 416 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TFB1MQ8WVM0 346 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 PIH1D2Q8WWB5 315 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 P3H4Q92791 437 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 RAB7BQ96AH8 199 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ECHDC3Q96DC8 303 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 APIPQ96GX9 242 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 KIRREL1Q96J84 757 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CLPTM1LQ96KA5 538 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ZNF641Q96N77 438 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 TSGA13Q96PP4 275 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 QKIQ96PU8 341 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS41-205ENST00000414632 KLF6Q99612 283 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 IL12RB2Q99665 862 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TDRD1Q9BXT4 1180 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 OSBPL8Q9BZF1 889 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TCEAL2Q9H3H9 227 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 GDF3Q9NR23 364 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 DLL4Q9NR61 685 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 KLHL8Q9P2G9 620 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 DKK3Q9UBP4 350 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ZFP69BQ9UJL9 534 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PPP2R2CQ9Y2T4 447 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 OR1A2Q9Y585 309 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CNOT1A5YKK6 2376 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 COL5A1P20908 1838 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 CABIN1Q9Y6J0 2220 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 CEP295Q9C0D2 2601 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 A0A0J9YYE9 177 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 A0A1B0GTQ1 180 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 A0A1W2PR48 441 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 H3BUI4 141 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 APOC4-APOC2K7ER74 178 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 KPNA5O15131 536 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 KCNN4O15554 427 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 KRT86O43790 486 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 SOCS5O75159 536 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 TMEM127O75204 238 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 RECQL5O94762 991 aaPredicted RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 HEXIM1O94992 359 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 CLDN7O95471 211 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 TRBC1P01850 177 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 APOC2P02655 101 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 C1SP09871 688 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 CYP2A6P11509 494 aaPredicted RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 EPHA8P29322 1005 aaPredicted RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 VIPR1P32241 457 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 NR2C2P49116 596 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 THOP1P52888 689 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 CLDN6P56747 220 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 EIF3EP60228 445 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 RAB1AP62820 205 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 POLR2LP62875 67 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 SIM1P81133 766 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms