RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
SEMA3F-202ENST00000413852 UMODL1-AS1Q8N2C9 162 aa14.34□□□□□ -0.11
SEMA3F-202ENST00000413852 MFSD4AQ8N468 514 aa14.34□□□□□ -0.11
SEMA3F-202ENST00000413852 OR56A4Q8NGH8 313 aa14.34□□□□□ -0.11
SEMA3F-202ENST00000413852 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
SEMA3F-202ENST00000413852 DERL2Q9GZP9 239 aa14.34□□□□□ -0.11
SEMA3F-202ENST00000413852 SCUBE2Q9NQ36 999 aa14.34□□□□□ -0.11
SEMA3F-202ENST00000413852 CXCR6O00574 342 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 LSM1O15116 133 aaKnown RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 MT-ND2P03891 347 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 C7P10643 843 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 SUOXP51687 545 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 NEK2P51955 445 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 SLC14A1Q13336 389 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 CBX2Q14781 532 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 MAPRE1Q15691 268 aaKnown RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 RBM48Q5RL73 367 aaKnown RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 GOLGA7Q7Z5G4 137 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 B3GNT8Q7Z7M8 397 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 BRSK1Q8TDC3 778 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 MAGED4Q96JG8 741 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 INPP5KQ9BT40 448 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 KIAA1522Q9P206 1035 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 GIT1Q9Y2X7 761 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 GPC6Q9Y625 555 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 LCHNA4D1U4 455 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 PSMD11O00231 422 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 ANKRD28O15084 1053 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 GMNNO75496 209 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF682O95780 498 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 ANGPTL1O95841 491 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 HOXD8P13378 290 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 MVKQ03426 396 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 CYP4F3Q08477 520 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 SELENBP1Q13228 472 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 VARS2Q5ST30 1063 aaKnown RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 LINGO4Q6UY18 593 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 DCP2Q8IU60 420 aaKnown RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 RNF175Q8N4F7 328 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 FAM83FQ8NEG4 500 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF548Q8NEK5 533 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 ATAD3AQ9NVI7 634 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 SCHIP1Q9P0W5 487 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 ABCG2Q9UNQ0 655 aa14.33□□□□□ -0.12
SEMA3F-202ENST00000413852 SLC12A8A0AV02 714 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 BCKDKO14874 412 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 CHRNA1P02708 482 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 PABPC1P11940 636 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 TGM1P22735 817 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 GTF2E2P29084 291 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 MC4RP32245 332 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 CYP2C18P33260 490 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 SLC26A3P40879 764 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 COLEC12Q5KU26 742 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 TTC23Q5W5X9 447 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF772Q68DY9 489 aaPredicted RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 SPATC1Q76KD6 591 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 LIX1Q8N485 282 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 CLDN19Q8N6F1 224 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 PNPT1Q8TCS8 783 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 CD200R1Q8TD46 325 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 SLC10A4Q96EP9 437 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ASB2Q96Q27 587 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 YTHDF1Q9BYJ9 559 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 POLR1EQ9GZS1 481 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 SEPT3Q9UH03 358 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 TRMT6Q9UJA5 497 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF451Q9Y4E5 1061 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 AREL1O15033 823 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 TCEA1P23193 301 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF135P52742 658 aaPredicted RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 PHC1P78364 1004 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 PWP1Q13610 501 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 GBX1Q14549 363 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 C10orf120Q5SQS8 335 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 CES5AQ6NT32 575 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 SUSD1Q6UWL2 747 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 GOLM1Q8NBJ4 401 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 GTF2H4Q92759 462 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 BTBD2Q9BX70 525 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 HMG20AQ9NP66 347 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 DNAJB9Q9UBS3 223 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 PRG3Q9Y2Y8 225 aaPredicted RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 PCDHGA10Q9Y5H3 936 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 E5RI56 91 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 RHOQP17081 205 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 CDKN2CP42773 168 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 SERINC3Q13530 473 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 COQ5Q5HYK3 327 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ANKRD13BQ86YJ7 626 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 IPPKQ9H8X2 491 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ZBTB20Q9HC78 741 aaPredicted RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 SYTL2Q9HCH5 934 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ELOVL2Q9NXB9 296 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 ZIM2Q9NZV7 527 aa14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 INTS6Q9UL03 887 aaKnown RBP14.32□□□□□ -0.12
SEMA3F-202ENST00000413852 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 C16orf96A6NNT2 1141 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 TNPO2O14787 897 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms