RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 BPIFA1Q9NP55 256 aa9.28□□□□□ -0.92
RFFL-203ENST00000413582 IL26Q9NPH9 171 aa9.28□□□□□ -0.92
RFFL-203ENST00000413582 C1GALT1Q9NS00 363 aa9.28□□□□□ -0.92
RFFL-203ENST00000413582 ANAPC7Q9UJX3 599 aa9.28□□□□□ -0.92
RFFL-203ENST00000413582 OSGIN2Q9Y236 505 aa9.28□□□□□ -0.92
RFFL-203ENST00000413582 PPP2R2CQ9Y2T4 447 aa9.28□□□□□ -0.92
RFFL-203ENST00000413582 CACNA1CQ13936 2221 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 HEATR9A2RTY3 570 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 OR2AG2A6NM03 316 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 KLHL41O60662 606 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 NDST3O95803 873 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 ST6GAL1P15907 406 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 POLR2CP19387 275 aaPredicted RBP9.27□□□□□ -0.93
RFFL-203ENST00000413582 HLA-DPA1P20036 260 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 CDH3P22223 829 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 PBLDP30039 288 aaPredicted RBP9.27□□□□□ -0.93
RFFL-203ENST00000413582 GJC1P36383 396 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 HADHAP40939 763 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 PREPP48147 710 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 LMAN1P49257 510 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 SOX8P57073 446 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 ADCY2Q08462 1091 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 PPIDQ08752 370 aaKnown RBP9.27□□□□□ -0.93
RFFL-203ENST00000413582 SSPNQ14714 243 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 SLC14A2Q15849 920 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 PCSK7Q16549 785 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 ATP13A4Q4VNC1 1196 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 METRNLQ641Q3 311 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 CPNE8Q86YQ8 564 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 REXO1L1PQ8IX06 675 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 CCNYQ8ND76 341 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 DDHD1Q8NEL9 900 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 GRHL3Q8TE85 626 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 PPP4R1Q8TF05 950 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 ZFPM2Q8WW38 1151 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 RMDN2Q96LZ7 410 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 TTC25Q96NG3 672 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 WDR77Q9BQA1 342 aaPredicted RBP9.27□□□□□ -0.93
RFFL-203ENST00000413582 PACSIN1Q9BY11 444 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 CEP41Q9BYV8 373 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 PITPNM3Q9BZ71 974 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 WWP1Q9H0M0 922 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 THAP2Q9H0W7 228 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 SPTLC3Q9NUV7 552 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 P4HTMQ9NXG6 502 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 IP6K2Q9UHH9 426 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 NOVA2Q9UNW9 492 aaKnown RBP9.27□□□□□ -0.93
RFFL-203ENST00000413582 PCDHA13Q9Y5I0 950 aa9.27□□□□□ -0.93
RFFL-203ENST00000413582 A0A0A6YYK5 440 aaPredicted RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 E7EQ34 232 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 MATN2O00339 956 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 PEX12O00623 359 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 GAPDHSO14556 408 aaPredicted RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 ZNF749O43361 778 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 LDB2O43679 373 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 CNOT3O75175 753 aaKnown RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 IGHEP01854 428 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 STSP08842 583 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 H2AFZP0C0S5 128 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 EDN3P14138 238 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 AGXTP21549 392 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 HMGCLP35914 325 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 SPAM1P38567 509 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 FOLR3P41439 243 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 SSR1P43307 286 aaKnown RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 TSFMP43897 325 aaKnown RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 FOXL2P58012 376 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 KIF5AQ12840 1032 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 PRKAA1Q13131 559 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 TCEAL1Q15170 157 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 HIF1AQ16665 826 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 ZXDCQ2QGD7 858 aaPredicted RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 LDLRAP1Q5SW96 308 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 GPRC6AQ5T6X5 926 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 TMEM220Q6QAJ8 160 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 H2AFVQ71UI9 128 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 B4GALNT4Q76KP1 1039 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 PPP1R32Q7Z5V6 425 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 NT5DC3Q86UY8 548 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 TMEM151BQ8IW70 566 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 RNF10Q8N5U6 811 aaKnown RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 BEND7Q8N7W2 519 aaPredicted RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 OR2Y1Q8NGV0 311 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 DTX3LQ8TDB6 740 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 LURAP1Q96LR2 239 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 TRAPPC9Q96Q05 1148 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 SLC7A5P2Q9GIP4 190 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 SLC25A51Q9H1U9 297 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 SMOXQ9NWM0 555 aa9.26□□□□□ -0.93
RFFL-203ENST00000413582 REXO2Q9Y3B8 237 aaKnown RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 PTRH2Q9Y3E5 179 aaKnown RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 DNMT3AQ9Y6K1 912 aaPredicted RBP9.26□□□□□ -0.93
RFFL-203ENST00000413582 GSAPA4D1B5 854 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 MGAT4DA6NG13 374 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 H3BMH7 237 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 GPR37O15354 613 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 UGT1A9O60656 530 aa9.25□□□□□ -0.93
RFFL-203ENST00000413582 MT-CYBP00156 380 aaPredicted RBP9.25□□□□□ -0.93
RFFL-203ENST00000413582 CYP1A2P05177 515 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms