RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 POP5Q969H6 163 aaKnown RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 C12orf66Q96MD2 445 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 WDR92Q96MX6 357 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 KCNJ13O60928 360 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 APBB3O95704 486 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SEMA4FO95754 770 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 CFIP05156 583 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ENO2P09104 434 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 HGFP14210 728 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SERPINB1P30740 379 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 LEPRP48357 1165 aaKnown RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 HNMTP50135 292 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 HPCAP84074 193 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TMEM115Q12893 351 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SF1Q15637 639 aaKnown RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PLEKHS1Q5SXH7 462 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 DEPDC1Q5TB30 811 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PIGWQ7Z7B1 504 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 HORMAD1Q86X24 394 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SPAG16Q8N0X2 631 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 RPLP0P6Q8NHW5 317 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 OSBPL6Q9BZF3 934 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 DNAJC28Q9NX36 388 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PRDM4Q9UKN5 801 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 C15orf38-AP3S2A0A0A6YYH1 394 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 C6P13671 934 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ADSLP30566 484 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 CTHP32929 405 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SOAT1P35610 550 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 HPCAL1P37235 193 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ETV3P41162 512 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 CXCL12P48061 93 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ELF3P78545 371 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TSNQ15631 228 aaKnown RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ADRM1Q16186 407 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SLC5A9Q2M3M2 681 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PRR23BQ6ZRT6 265 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ARPINQ7Z6K5 226 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TMC8Q8IU68 726 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 MIER2Q8N344 545 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 FSTL5Q8N475 847 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 CDYL2Q8N8U2 506 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 BANPQ8N9N5 519 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 MYADMQ96S97 322 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 MIPEPQ99797 713 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 FAIM2Q9BWQ8 316 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 FANCEQ9HB96 536 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 MAP10Q9P2G4 905 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PDP2Q9P2J9 529 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SLC17A7Q9P2U7 560 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 LOC285095A0A1B0GVY8 99 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 FCGR1AP12314 374 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 C4BPBP20851 252 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CCT3P49368 545 aaKnown RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 LCP2Q13094 533 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 RCN1Q15293 331 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 AGKQ53H12 422 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CXorf57Q6NSI4 855 aaKnown RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 PARM1Q6UWI2 310 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 ZDHHC14Q8IZN3 488 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 ARRDC2Q8TBH0 407 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 DLG3Q92796 817 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SLC38A3Q99624 504 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 GDF15Q99988 308 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SLC17A9Q9BYT1 436 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 MOCS1Q9NZB8 636 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 LHX3Q9UBR4 397 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 NFS1Q9Y697 457 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 F5P12259 2224 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 HNRNPRO43390 633 aaKnown RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 PDHA1P08559 390 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CHRM1P11229 460 aaPredicted RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CDH2P19022 906 aaPredicted RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 OLR1P78380 273 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 RPL6Q02878 288 aaKnown RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 FCHO2Q0JRZ9 810 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SP140Q13342 867 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CPSF6Q16630 551 aaKnown RBP eCLIP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 OTUD1Q5VV17 481 aaPredicted RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CYP20A1Q6UW02 462 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CCDC80Q76M96 950 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 DPPA4Q7L190 304 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 GKN2Q86XP6 184 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SCAMP4Q969E2 229 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 ECSITQ9BQ95 431 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SLC25A23Q9BV35 468 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 GPR174Q9BXC1 333 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CAAP1Q9H8G2 361 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 ATAD3AQ9NVI7 634 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 IL17CQ9P0M4 197 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 THAP10Q9P2Z0 257 aaPredicted RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 RABL2BQ9UNT1 228 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 TRAF6Q9Y4K3 522 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CXorf51AA0A1B0GTR3 108 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 MAGEA13PA6NCF6 341 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CXorf49A8MYA2 514 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms