RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ACP5P13686 325 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 ALOX15P16050 662 aaPredicted RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 CYP2A7P20853 494 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 KELP23276 732 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PDHA2P29803 388 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 NUDT1P36639 197 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 BDKRB1P46663 353 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 CXCL12P48061 93 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 AGTR2P50052 363 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 AP1S2P56377 157 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 YPEL5P62699 121 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 DMPKQ09013 629 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 GALNT1Q10472 559 aaPredicted RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 PRKAA1Q13131 559 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 RPA4Q13156 261 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PCBP2Q15366 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS41-204ENST00000413141 PYCR3Q53H96 274 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 FBXO48Q5FWF7 155 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 CDKL4Q5MAI5 379 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 SULT1C3Q6IMI6 304 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 MBOAT1Q6ZNC8 495 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 RPS27LQ71UM5 84 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 MAVSQ7Z434 540 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 ABI3BPQ7Z7G0 1075 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 CUZD1Q86UP6 607 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PDZD3Q86UT5 571 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 AMZ2Q86W34 360 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 GALNT13Q8IUC8 556 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 CFAP206Q8IYR0 622 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 CCDC197Q8NCU1 140 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 OR56A4Q8NGH8 313 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 RFWD2Q8NHY2 731 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PIWIL2Q8TC59 973 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 AGR3Q8TD06 166 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 RHBDF1Q96CC6 855 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 SPACA7Q96KW9 195 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 BMFQ96LC9 184 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 WDR92Q96MX6 357 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 NSUN5Q96P11 429 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 OR2M4Q96R27 311 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 EGFL8Q99944 293 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 ORAI3Q9BRQ5 295 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 SIKE1Q9BRV8 207 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PCED1AQ9H1Q7 454 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 OR52A5Q9H2C5 316 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 DPEP2Q9H4A9 486 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PARVBQ9HBI1 364 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 EML4Q9HC35 981 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 MRPL40Q9NQ50 206 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 GPR27Q9NS67 375 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PNPOQ9NVS9 261 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 ARL15Q9NXU5 204 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 WWOXQ9NZC7 414 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 SLC23A2Q9UGH3 650 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 DCTN4Q9UJW0 460 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PTBP2Q9UKA9 531 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 PCTPQ9UKL6 214 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 SUFUQ9UMX1 484 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 DMTF1Q9Y222 760 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 RAP2CQ9Y3L5 183 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 HS3ST3A1Q9Y663 406 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 TRIOO75962 3097 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 DOCK9Q9BZ29 2069 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 A0A0G2JND7 137 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 A0A1W2PPC4 97 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 KRT87PA6NCN2 255 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 PABPN1LA6NDY0 278 aaKnown RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 TMEM233B4DJY2 109 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 AXIN1O15169 862 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 TAPBPO15533 448 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 PI15O43692 258 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 NDUFS2O75306 463 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 CATP04040 527 aaKnown RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 ANXA5P08758 320 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 HIST1H2AGP0C0S8 130 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 SLC35G4P0C7Q5 338 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 KITP10721 976 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 TSPAN8P19075 237 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 AOC1P19801 751 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 HIST1H2ADP20671 130 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 HTR1BP28222 390 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ACADLP28330 430 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 GNPDA1P46926 289 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 RABIFP47224 123 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 SLC6A12P48065 614 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 HSPA7P48741 367 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 RPIAP49247 311 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 HNMTP50135 292 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 HK2P52789 917 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 THOP1P52888 689 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 AQP5P55064 265 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 CDH13P55290 713 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 NAA20P61599 178 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 CLCQ05315 142 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 DMWDQ09019 674 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ABRQ12979 859 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 LCP2Q13094 533 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 C18orf21Q32NC0 220 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 SH2D4BQ5SQS7 431 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 METRNLQ641Q3 311 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms