RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PTBP3O95758 552 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 F2P00734 622 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 IL1R2P27930 398 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 POLR2IP36954 125 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 PRKCZQ05513 592 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 KIF19Q2TAC6 998 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 TMEM119Q4V9L6 283 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ZNF805Q5CZA5 627 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 NHSL2Q5HYW2 709 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 JADE1Q6IE81 842 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 KCTD8Q6ZWB6 473 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 TRILQ7L0X0 811 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 LHFPL3Q86UP9 236 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ALYREFQ86V81 257 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 RETREG3Q86VR2 466 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ANKRD46Q86W74 232 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 SLC22A15Q8IZD6 547 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 CHDHQ8NE62 594 aaPredicted RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 SLC7A6Q92536 515 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 RFKQ969G6 155 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 SF3B5Q9BWJ5 86 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 GSDMCQ9BYG8 508 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 MRPL37Q9BZE1 423 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 EFCAB1Q9HAE3 211 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ABCB10Q9NRK6 738 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 BFARQ9NZS9 450 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 COPZ2Q9P299 210 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 MROH6A6NGR9 719 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 WWP2O00308 870 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 CREG1O75629 220 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 PCDH8O95206 1070 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 HSPA4LO95757 839 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 CD3GP09693 182 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ATF2P15336 505 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 XRCC1P18887 633 aaPredicted RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 ADRA1DP25100 572 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 MCAMP43121 646 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 YAP1P46937 504 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 SUOXP51687 545 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ASIC1P78348 528 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 PDIA2Q13087 525 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 SLC12A1Q13621 1099 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 SCARB2Q14108 478 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 IRF3Q14653 427 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 MESDQ14696 234 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 GANABQ14697 944 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 KCNMB1Q16558 191 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 CRTC2Q53ET0 693 aaPredicted RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 GPAT3Q53EU6 434 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 USP39Q53GS9 565 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 PDZK1Q5T2W1 519 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 MEDAGQ5VYS4 303 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 EFCAB12Q6NXP0 572 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 RBMS3Q6XE24 437 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 OVCH2Q7RTZ1 564 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 PRPF39Q86UA1 669 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 ADHFE1Q8IWW8 467 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 TCTE3Q8IZS6 198 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ARRDC1Q8N5I2 433 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 OR5M1Q8NGP8 315 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 OR6X1Q8NH79 312 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 PTERQ96BW5 349 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 ARMC5Q96C12 935 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 TEPSINQ96N21 525 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 C2orf88Q9BSF0 95 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 MTG1Q9BT17 334 aaPredicted RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 MYL10Q9BUA6 226 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 SORBS1Q9BX66 1292 aaKnown RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 OSGEPQ9NPF4 335 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 PRMT8Q9NR22 394 aaPredicted RBP5.15□□□□□ -1.58
HERC4-205ENST00000412272 SLC22A11Q9NSA0 550 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 NUDT5Q9UKK9 219 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 CA14Q9ULX7 337 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 MGAT4BQ9UQ53 548 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 PCDHA10Q9Y5I2 948 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 CDY1Q9Y6F8 540 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 FAM234BA2RU67 622 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 SLC30A4O14863 429 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 UGT2B11O75310 529 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 UBXN7O94888 489 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 CRHP06850 196 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 ARP10275 920 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 HDCP19113 662 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 MSH3P20585 1137 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 CRABP1P29762 137 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 IL12RB1P42701 662 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 FXR2P51116 673 aaKnown RBP eCLIP5.15□□□□□ -1.59
HERC4-205ENST00000412272 BCAR1P56945 870 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 SNRPD2P62316 118 aaKnown RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 SLC25A3Q00325 362 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 FADDQ13158 208 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 KLF1Q13351 362 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 FLOT2Q14254 428 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 FGL2Q14314 439 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 LIN9Q5TKA1 542 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 PTRHD1Q6GMV3 140 aaKnown RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 FRMPD2BQ6IN97 320 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 RRM2BQ7LG56 351 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 DNAJA4Q8WW22 397 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 TFAP2CQ92754 450 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms