RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ZNF221Q9UK13 617 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 HES2Q9Y543 173 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MTCH2Q9Y6C9 303 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PCM1Q15154 2024 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ASXL2Q76L83 1435 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PCDH15Q96QU1 1955 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 EP400Q96L91 3159 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 PLCE1Q9P212 2302 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SPAG17Q6Q759 2223 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 BAZ2AQ9UIF9 1905 aaKnown RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TUBGCP6Q96RT7 1819 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 IGLV2-33A0A075B6J2 118 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TRBV6-6A0A0A6YYG2 114 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 A0A1B0GUH1 482 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 C7orf66A4D0T2 115 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM90A18PA6NE21 464 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM90A16PA6NEW6 464 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SAC3D1A6NKF1 404 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM90A9PA6NNJ1 464 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF891A8MT65 544 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM90A5PA8MXJ8 464 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 C9JVG2 144 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 F5H0A9 414 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 K7EM74 188 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 K7EP34 96 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ANKRD28O15084 1053 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TADA2AO75478 443 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 KRT37O76014 449 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RGS11O94810 467 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 AP2A2O94973 939 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 PGM3O95394 542 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TSPAN13O95857 204 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 MT1FP04733 61 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RB1P06400 928 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPX1P07203 203 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 CLTAP09496 248 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RHOXF2BP0C7M4 288 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM90A15PP0C7V4 464 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM90A14PP0C7W9 464 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 DARSP14868 501 aaKnown RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TNFAIP3P21580 790 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 KCNA3P22001 575 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 LPOP22079 712 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 COILP38432 576 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 UBA7P41226 1012 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 PRKCIP41743 596 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RPS9P46781 194 aaKnown RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SOX9P48436 509 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 CPT1AP50416 773 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF80P51504 273 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 KIF11P52732 1056 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TERF1P54274 439 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC37A1P57057 533 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SNRPD1P62314 119 aaKnown RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ACTA2P62736 377 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ACTC1P68032 377 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 HOXC5Q00444 222 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 OC90Q02509 493 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF763Q0D2J5 394 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 MRPL28Q13084 256 aaKnown RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RPS6KA1Q15418 735 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF141Q15928 474 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 XKR9Q5GH70 373 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 DENND2CQ68D51 928 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 C1orf94Q6P1W5 598 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TAF2Q6P1X5 1199 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 WDR93Q6P2C0 686 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC4A10Q6U841 1118 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ATF7IPQ6VMQ6 1270 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 DPY19L3Q6ZPD9 716 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FRMD7Q6ZUT3 714 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 G2E3Q7L622 706 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 DPH6Q7L8W6 267 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TIPARPQ7Z3E1 657 aaKnown RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 PPP1R32Q7Z5V6 425 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPBP1Q86WP2 473 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 PHC2Q8IXK0 858 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 BATF2Q8N1L9 274 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RNF149Q8NC42 400 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMEM104Q8NE00 496 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 LFNGQ8NES3 379 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 UBALD1Q8TB05 177 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FNDC8Q8TC99 324 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 WFDC5Q8TCV5 224 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RAET1EQ8TD07 263 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 NAT14Q8WUY8 206 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RUBCNQ92622 972 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 APOLD1Q96LR9 279 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 CCDC114Q96M63 670 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 CEP295NLQ96MC4 621 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ERMAPQ96PL5 475 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 GMLQ99445 158 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RTP3Q9BQQ7 232 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 CBWD1Q9BRT8 395 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RTKNQ9BST9 563 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 NDFIP1Q9BT67 221 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SHANK2-AS3Q9BTD1 123 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RNF126Q9BV68 326 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ST6GALNAC5Q9BVH7 336 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 PLA2G2FQ9BZM2 168 aa-1.67□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms