RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 UPK3BL1B0FP48 263 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 UPK3BL2E5RIL1 263 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 CSHL1Q14406 222 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 USP39Q53GS9 565 aaKnown RBP16.59■□□□□ 0.25
GCFC2-202ENST00000409857 HMBOX1Q6NT76 420 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 TRIML2Q8N7C3 387 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 GAB3Q8WWW8 586 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 TMEM79Q9BSE2 394 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 TPSD1Q9BZJ3 242 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 MRPL46Q9H2W6 279 aaKnown RBP16.59■□□□□ 0.25
GCFC2-202ENST00000409857 RHBDL2Q9NX52 303 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 NCKIPSDQ9NZQ3 722 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 SERGEFQ9UGK8 458 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 TRPC5OSA6NMA1 111 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 PLRG1O43660 514 aaKnown RBP16.59■□□□□ 0.25
GCFC2-202ENST00000409857 NDST3O95803 873 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 C8BP07358 591 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 CKMT2P17540 419 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 TSPAN8P19075 237 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 ARCN1P48444 511 aaKnown RBP16.59■□□□□ 0.25
GCFC2-202ENST00000409857 CDH15P55291 814 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 RHDQ02161 417 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 DMWDQ09019 674 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 FASTKQ14296 549 aaKnown RBP16.59■□□□□ 0.25
GCFC2-202ENST00000409857 POM121L1PQ3SYA9 428 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 ZNF789Q5FWF6 425 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 RBM20Q5T481 1227 aaKnown RBP16.59■□□□□ 0.25
GCFC2-202ENST00000409857 SPACA7Q96KW9 195 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 FSD1LQ9BXM9 530 aa16.59■□□□□ 0.25
GCFC2-202ENST00000409857 SUCOQ9UBS9 1254 aaKnown RBP16.59■□□□□ 0.25
GCFC2-202ENST00000409857 A0A0J9YVX5 310 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 SP9P0CG40 484 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 COL6A2P12110 1019 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 HLA-DPA1P20036 260 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 CNR2P34972 360 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 CHRNA4P43681 627 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 PXNP49023 591 aaPredicted RBP16.58■□□□□ 0.25
GCFC2-202ENST00000409857 FNTBP49356 437 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 ELP6Q0PNE2 266 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 PCSK7Q16549 785 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 PCID2Q5JVF3 399 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 RANBP10Q6VN20 620 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.58■□□□□ 0.25
GCFC2-202ENST00000409857 LINC00523Q86TU6 105 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 C11orf74Q86VG3 221 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 CARM1Q86X55 608 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 GANCQ8TET4 914 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 MCCC1Q96RQ3 725 aaPredicted RBP16.58■□□□□ 0.25
GCFC2-202ENST00000409857 TBL1YQ9BQ87 522 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 FICDQ9BVA6 458 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 ARNT2Q9HBZ2 717 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 ZSCAN32Q9NX65 697 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 NSMCE4AQ9NXX6 385 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 CNOT11Q9UKZ1 510 aaKnown RBP16.58■□□□□ 0.25
GCFC2-202ENST00000409857 CEP192Q8TEP8 1941 aa16.58■□□□□ 0.25
GCFC2-202ENST00000409857 IGHV1OR15-9A0A0B4J2B8 117 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 ATP6AP2A0A1C7CYW4 349 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 ANKRD66B4E2M5 251 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 C10orf142B7Z368 130 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 PSMD12O00232 456 aaPredicted RBP16.58■□□□□ 0.24
GCFC2-202ENST00000409857 AREL1O15033 823 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 NPHS1O60500 1241 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 TIPRLO75663 272 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 ATP6AP2O75787 350 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 CD6P30203 668 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 TXNL4AP83876 142 aaKnown RBP16.58■□□□□ 0.24
GCFC2-202ENST00000409857 ZNF470Q6ECI4 717 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 DENND5AQ6IQ26 1287 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 ERAP2Q6P179 960 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 NEK5Q6P3R8 708 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 PHF21BQ96EK2 531 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 SCRN2Q96FV2 425 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 LYSMD1Q96S90 227 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 BTBD1Q9H0C5 482 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 PCED1AQ9H1Q7 454 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 OLAHQ9NV23 265 aa16.58■□□□□ 0.24
GCFC2-202ENST00000409857 UTP6Q9NYH9 597 aaKnown RBP16.58■□□□□ 0.24
GCFC2-202ENST00000409857 WSB2Q9NYS7 404 aaPredicted RBP16.58■□□□□ 0.24
GCFC2-202ENST00000409857 A0A0J9YYE9 177 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 HEATR9A2RTY3 570 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 ZNF839A8K0R7 811 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 UBDO15205 165 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 H6PDO95479 791 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 TRBC1P01850 177 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 FGF1P05230 155 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 ATXN1LP0C7T5 689 aaKnown RBP16.57■□□□□ 0.24
GCFC2-202ENST00000409857 XPAP23025 273 aaPredicted RBP16.57■□□□□ 0.24
GCFC2-202ENST00000409857 EMP3P54852 163 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 ADPRHP54922 357 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 TAS2R38P59533 333 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 C6orf10Q5SRN2 563 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 BORAQ6PGQ7 559 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 SLC36A4Q6YBV0 504 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 CHSY3Q70JA7 882 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 PIWIL4Q7Z3Z4 852 aaKnown RBP16.57■□□□□ 0.24
GCFC2-202ENST00000409857 PAF1Q8N7H5 531 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 MRPL57Q9BQC6 102 aaKnown RBP16.57■□□□□ 0.24
GCFC2-202ENST00000409857 CD93Q9NPY3 652 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 IGSF5Q9NSI5 407 aa16.57■□□□□ 0.24
GCFC2-202ENST00000409857 CNOT6Q9ULM6 557 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms