RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SLC25A52Q3SY17 297 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SLC9B1Q4ZJI4 515 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF648Q5T619 568 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 HSDL2Q6YN16 418 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SYNPOQ8N3V7 929 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PIK3C3Q8NEB9 887 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SERINC1Q9NRX5 453 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 DNAAF2Q9NVR5 837 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RAPGEFL1Q9UHV5 662 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PTCH2Q9Y6C5 1203 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 BLOC1S5-TXNDC5H3BN57 136 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 CHP2O43745 196 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 KLF8O95600 359 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 FHP07954 510 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 MCCD1P59942 119 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RPS24P62847 133 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 BNIP2Q12982 314 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ENPP2Q13822 863 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PROKR2Q8NFJ6 384 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 GIPC3Q8TF64 312 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 GPR20Q99678 358 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PLAGL2Q9UPG8 496 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 FRMPD4Q14CM0 1322 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 INSIG1O15503 277 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 MFSD11O43934 449 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RPP40O75818 363 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TCF4P15884 667 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 IL12AP29459 219 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 FAM110CQ1W6H9 321 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PRPF38BQ5VTL8 546 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ANKRD23Q86SG2 305 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TERB1Q8NA31 727 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 COQ8AQ8NI60 647 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RCN3Q96D15 328 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 HIC2Q96JB3 615 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 MRPL57Q9BQC6 102 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 EIF2B3Q9NR50 452 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SNTG1Q9NSN8 517 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 A0A0J9YYE9 177 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF860A6NHJ4 632 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 CAPN14A8MX76 684 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 C11orf98E9PRG8 122 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SLC22A3O75751 556 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 POLR2CP19387 275 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RBMS1P29558 406 aaKnown RBP8.29□□□□□ -1.08
SCN9A-203ENST00000409672 MARCKSL1P49006 195 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 MTTPP55157 894 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SEC23AQ15436 765 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 PRRT3Q5FWE3 981 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SUSD1Q6UWL2 747 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 LINGO2Q7L985 606 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 SPPL2BQ8TCT7 592 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ASB2Q96Q27 587 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 EDN3P14138 238 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TAS2R40P59535 323 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 ARFRP1Q13795 201 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 RAB30Q15771 203 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 GCNT6Q5T4J0 391 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 LIPMQ5VYY2 423 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 TPRG1Q6ZUI0 275 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 VAT1Q99536 393 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 CHRAC1Q9NRG0 131 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 VWA7Q9Y334 891 aa8.29□□□□□ -1.08
SCN9A-203ENST00000409672 MYH2Q9UKX2 1941 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 FGF18O76093 207 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CYP11A1P05108 521 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CHIT1Q13231 466 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 LDLRAP1Q5SW96 308 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TAS1R3Q7RTX0 852 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 TSACCQ96A04 125 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 MAU2Q9Y6X3 613 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 SMIM28A0A1B0GU29 152 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 HAT1O14929 419 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 KLK1P06870 262 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 GPD2P43304 727 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF135P52742 658 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CLRN1P58418 232 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 SMIM11AP58511 58 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 GNA12Q03113 381 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ITIH4Q14624 930 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 DUSP28Q4G0W2 176 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 FAM69BQ5VUD6 431 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 UNC93AQ86WB7 457 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 CPNE9Q8IYJ1 553 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF101Q8IZC7 436 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 MYCBPAPQ8TBZ2 947 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 PIWIL1Q96J94 861 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 OR1F2PQ96R84 312 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 MIPEPQ99797 713 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 SPAG4Q9NPE6 437 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 PTPRMP28827 1452 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 AZIN1O14977 448 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 ITGA2BP08514 1039 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 PTPN4P29074 926 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 PAPD7Q5XG87 772 aaKnown RBP8.28□□□□□ -1.08
SCN9A-203ENST00000409672 C1orf186Q6ZWK4 172 aa8.28□□□□□ -1.08
SCN9A-203ENST00000409672 VASH1Q7L8A9 365 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms