RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 LMAN2LQ9H0V9 348 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 ARHGEF3Q9NR81 526 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 NDE1Q9NXR1 346 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 FAM32AQ9Y421 112 aaKnown RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 CAPN8A6NHC0 703 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 RFPL1O75677 317 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 VNN2O95498 520 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 GNSP15586 552 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 TIMP2P16035 220 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 JUNDP17535 347 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 CLNS1AP54105 237 aaKnown RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 ZXDBP98169 803 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 OTUD3Q5T2D3 398 aaPredicted RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 BEND5Q7L4P6 421 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 EME1Q96AY2 570 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 OR51B5Q9H339 312 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 AHSPQ9NZD4 102 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 KIF17Q9P2E2 1029 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 TAGLN3Q9UI15 199 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 ZFHX2Q9C0A1 2572 aaPredicted RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 RP1P56715 2156 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 LOC730098B7Z3J9 87 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 HPGDP15428 266 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 CSNK1EP49674 416 aaKnown RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 KCNJ2P63252 427 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 RALGDSQ12967 914 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 PHF19Q5T6S3 580 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 LILRA6Q6PI73 481 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 GPR135Q8IZ08 494 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 KYQ8NBH2 561 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 OR9I1Q8NGQ6 314 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 HIC2Q96JB3 615 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 CCM2Q9BSQ5 444 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 RDH14Q9HBH5 336 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 IL17CQ9P0M4 197 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 STOX2Q9P2F5 926 aaPredicted RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 ORC6Q9Y5N6 252 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 WDR90Q96KV7 1748 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 CDC123O75794 336 aaPredicted RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 NUDT14O95848 222 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 THEGLP0DJG4 465 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 ACSL1P33121 698 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 RPS21P63220 83 aaKnown RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 MSLNQ13421 630 aaPredicted RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 TGFBIQ15582 683 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 MAPKAPK3Q16644 382 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 PAOXQ6QHF9 649 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 BNC2Q6ZN30 1099 aaPredicted RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 TLCD1Q96CP7 247 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 C19orf60Q96EN9 201 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 GPR22Q99680 433 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SLC2A11Q9BYW1 496 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 TRIM8Q9BZR9 551 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 RSPH9Q9H1X1 276 aaPredicted RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 ZNF180Q9UJW8 692 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 ACTL7BQ9Y614 415 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 A8MUA0 341 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SLCO1B7G3V0H7 640 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 CLDN9O95484 217 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 IL9P15248 144 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 IL10P22301 178 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 TMEM132CQ8N3T6 1108 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 C10orf53Q8N6V4 93 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 SEC14L1Q92503 715 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 VMP1Q96GC9 406 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SH3GL2Q99962 352 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 INTS10Q9NVR2 710 aaKnown RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 ZDHHC2Q9UIJ5 367 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 AK5Q9Y6K8 562 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 ACACAQ13085 2346 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 DLEC1Q9Y238 1755 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 OR10H2O60403 315 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 ID2Q02363 134 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SPIDRQ14159 915 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SLBPQ14493 270 aaKnown RBP eCLIP11.17□□□□□ -0.62
SNX13-202ENST00000409604 RCN1Q15293 331 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SLC9B1Q4ZJI4 515 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 C16orf89Q6UX73 402 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 ZYG11AQ6WRX3 759 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 LIPIQ6XZB0 460 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 ZC3H7AQ8IWR0 971 aaKnown RBP11.17□□□□□ -0.62
SNX13-202ENST00000409604 SCUBE1Q8IWY4 988 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 PANX1Q96RD7 426 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 SEMA6AQ9H2E6 1030 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 ARL8BQ9NVJ2 186 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 RNF11Q9Y3C5 154 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 UNC13CQ8NB66 2214 aa11.17□□□□□ -0.62
SNX13-202ENST00000409604 PPP6CO00743 305 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 PDHA2P29803 388 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 CSTF1Q05048 431 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 MESP2Q0VG99 397 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 LCP2Q13094 533 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 SEMA3BQ13214 749 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms