RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PLCL1Q15111 1095 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 PHF19Q5T6S3 580 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 KLHL35Q6PF15 583 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 GALNT7Q86SF2 657 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 PLXDC1Q8IUK5 500 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 ACVR1CQ8NER5 493 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 NXPE2Q96DL1 559 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 FERD3LQ96RJ6 166 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 ZMYND15Q9H091 742 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 CCDC68Q9H2F9 335 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 MOCS1Q9NZB8 636 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 DMGDHQ9UI17 866 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 COMMD10Q9Y6G5 202 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 CCDC187A0A096LP49 1063 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 C1QTNF9BB2RNN3 333 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 C1QTNF9P0C862 333 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 THRAP10827 490 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 CAPZBP47756 277 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 LSSP48449 732 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 CARSP49589 748 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 EIF3IQ13347 325 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 PLEKHS1Q5SXH7 462 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 TEDDM1Q5T9Z0 273 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 ZNF549Q6P9A3 640 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 CNSTQ6PJW8 725 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 VRK3Q8IV63 474 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 PHC3Q8NDX5 983 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 WDR36Q8NI36 951 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 KCNJ9Q92806 393 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 FAM129AQ9BZQ8 928 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 POLR1BQ9H9Y6 1135 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 LATS2Q9NRM7 1088 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 FAM114A2Q9NRY5 505 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 ZDHHC18Q9NUE0 388 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 TMEM9Q9P0T7 183 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 ASF1AQ9Y294 204 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 APC2O95996 2303 aa19.34■□□□□ 0.69
PDLIM2-207ENST00000409417 ACACAQ13085 2346 aa19.33■□□□□ 0.69
PDLIM2-207ENST00000409417 A0A1W2PNU3 283 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 E5RI56 91 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 HGSO14964 777 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 MPOP05164 745 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 MPSTP25325 297 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 GABRB3P28472 473 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 MGAT5Q09328 741 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 RAB11FIP2Q7L804 512 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 PALM2Q8IXS6 379 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 JPH3Q8WXH2 748 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 RSC1A1Q92681 617 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 CCDC74BQ96LY2 380 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 CMKLR1Q99788 373 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 RAB33BQ9H082 229 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 EPHA6Q9UF33 1036 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 MED16Q9Y2X0 877 aa19.33■□□□□ 0.68
PDLIM2-207ENST00000409417 MN1Q10571 1320 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 AHSGP02765 367 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 GABREP78334 506 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 CCDC25Q86WR0 208 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 TBC1D21Q8IYX1 336 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 OR5K2Q8NHB8 316 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 LCN9Q8WX39 176 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 FAM136AQ96C01 138 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 TRIT1Q9H3H1 467 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 TFB2MQ9H5Q4 396 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 L2HGDHQ9H9P8 463 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 ZFATQ9P243 1243 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 KLHL42Q9P2K6 505 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 DKK4Q9UBT3 224 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 POLG2Q9UHN1 485 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 SATB2Q9UPW6 733 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 PCDHGA8Q9Y5G5 932 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 AK5Q9Y6K8 562 aa19.32■□□□□ 0.68
PDLIM2-207ENST00000409417 KIF26BQ2KJY2 2108 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 PLD2O14939 933 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 CAPN5O15484 640 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 C9P02748 559 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 CAPNS1P04632 268 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 ATP5DP30049 168 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 CLCN7P51798 805 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 CYP4F3Q08477 520 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 PRKG2Q13237 762 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 GBX1Q14549 363 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 C3orf38Q5JPI3 329 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 CYS1Q717R9 158 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 ARHGAP22Q7Z5H3 698 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 LSMEM2Q8N112 164 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 FBXO39Q8N4B4 442 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 ZBTB2Q8N680 514 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 RCBTB1Q8NDN9 531 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 OR5AR1Q8NGP9 310 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 ZDHHC12Q96GR4 267 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 AARSD1Q9BTE6 412 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 HGH1Q9BTY7 390 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 CCDC86Q9H6F5 360 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 AKAP7Q9P0M2 348 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 SLC17A6Q9P2U8 582 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 GALPQ9UBC7 116 aa19.31■□□□□ 0.68
PDLIM2-207ENST00000409417 MAP1BP46821 2468 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 EPG5Q9HCE0 2579 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 TMEM8BA6NDV4 472 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms