RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 RANBP9Q96S59 729 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 INSM2Q96T92 566 aaPredicted RBP12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 NAP1L3Q99457 506 aaPredicted RBP12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 APOL2Q9BQE5 337 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 CHRNA10Q9GZZ6 450 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 APMAPQ9HDC9 416 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 SMARCAL1Q9NZC9 954 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 IL17BQ9UHF5 180 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 POMT2Q9UKY4 750 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 TMPRSS11EQ9UL52 423 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 ASF1AQ9Y294 204 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 WDR37Q9Y2I8 494 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 E7EQ34 232 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 LDB2O43679 373 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 IFNB1P01574 187 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 PAMP19021 973 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 ITGAXP20702 1163 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 PTPN4P29074 926 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 CASRP41180 1078 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 PMS2P54278 862 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 ITGA1P56199 1179 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 POU6F1Q14863 301 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 KIF26BQ2KJY2 2108 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 DEFB109BQ30KR1 87 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 DNAJC21Q5F1R6 531 aaKnown RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 RNF187Q5TA31 235 aaPredicted RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 IZUMO3Q5VZ72 239 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 KCTD11Q693B1 232 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 RAD9BQ6WBX8 426 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 GSTA5Q7RTV2 222 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 APLFQ8IW19 511 aaPredicted RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 ACRBPQ8NEB7 543 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 OR13C4Q8NGS5 318 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 ELMO1Q92556 727 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 ALG3Q92685 438 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 DLG3Q92796 817 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 MR1Q95460 341 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 DNAJC1Q96KC8 554 aaKnown RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 FOPNLQ96NB1 174 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 MAP3K3Q99759 626 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 TMEM121Q9BTD3 319 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 LACRTQ9GZZ8 138 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 ACSS2Q9NR19 701 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 EIF2B3Q9NR50 452 aaKnown RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 FAM8A1Q9UBU6 413 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 GPN3Q9UHW5 284 aaPredicted RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 SNX7Q9UNH6 387 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
SNORD88B-201ENST00000408454 COL6A6A6NMZ7 2263 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 IGHV5-51A0A0C4DH38 117 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 H3BMM5 538 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 GAPDHSO14556 408 aaPredicted RBP12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 SUN1O94901 812 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 ALPPP05187 535 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 ARSDP51689 593 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 TMPRSS15P98073 1019 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 KIR2DS3Q14952 304 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 UGT8Q16880 541 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 SDCCAG8Q86SQ7 713 aaPredicted RBP12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 EFCAB3Q8N7B9 438 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 OR4E2Q8NGC2 313 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 GPR150Q8NGU9 434 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 OR6P1Q8NGX9 317 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 NACC2Q96BF6 587 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 IL22Q9GZX6 179 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 ACTR5Q9H9F9 607 aaPredicted RBP12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 TXLNGQ9NUQ3 528 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 UTP6Q9NYH9 597 aaKnown RBP12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 BFARQ9NZS9 450 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 FARSAQ9Y285 508 aaKnown RBP12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 DUSP10Q9Y6W6 482 aa12.5□□□□□ -0.41
SNORD88B-201ENST00000408454 CDC14CA4D256 554 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 MROH6A6NGR9 719 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 SLC9B1P1A6NJY1 282 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 NKX2-8O15522 239 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 LIASO43766 372 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 IPO13O94829 963 aaKnown RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 FTCDO95954 541 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 EBLN1P0CF75 366 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 ITGB6P18564 788 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 POLR2CP19387 275 aaPredicted RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 PRDX3P30048 256 aaKnown RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 SH3BP2P78314 561 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 CYP4F2P78329 520 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 BOP1Q14137 746 aaKnown RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 ERV3-1Q14264 604 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 CCNG2Q16589 344 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 YOD1Q5VVQ6 348 aaPredicted RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 DENND5AQ6IQ26 1287 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 PWWP2BQ6NUJ5 590 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 TLDC1Q6P9B6 456 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 FAM83HQ6ZRV2 1179 aaPredicted RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 MED25Q71SY5 747 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms