RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 H3BMM5 538 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 KPNA5O15131 536 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 TOX3O15405 576 aaPredicted RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 SLCO2B1O94956 709 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 APOA4P06727 396 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ANKRD34CP0C6C1 535 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 JMJD7P0C870 316 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ELK3P41970 407 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 GFERP55789 205 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 EIF3BP55884 814 aaKnown RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 ARL4CP56559 192 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 HSPA14Q0VDF9 509 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 KRT33BQ14525 404 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 PLCL1Q15111 1095 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 WHAMMP3Q1A5X7 153 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 SYTL3Q4VX76 610 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 ZNF789Q5FWF6 425 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 SPANXN3Q5MJ09 141 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 DENND6AQ8IWF6 608 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 UNC5BQ8IZJ1 945 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 PHC3Q8NDX5 983 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 C9orf72Q96LT7 481 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 FERD3LQ96RJ6 166 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 WDR83Q9BRX9 315 aaKnown RBP18.71■□□□□ 0.59
RTN4-207ENST00000402434 B3GNT4Q9C0J1 378 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 RAXQ9Y2V3 346 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 PCDHGA7Q9Y5G6 932 aa18.71■□□□□ 0.59
RTN4-207ENST00000402434 CELSR3Q9NYQ7 3312 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 E7ESA3 106 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 CCL4P13236 92 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 ITIH1P19827 911 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 FMO4P31512 558 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 CSTF2P33240 577 aaKnown RBP eCLIP18.7■□□□□ 0.58
RTN4-207ENST00000402434 CTBP1Q13363 440 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 HSP90AA5PQ58FG0 334 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 SNAP47Q5SQN1 464 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 KCNMB4Q86W47 210 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 VRK3Q8IV63 474 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
RTN4-207ENST00000402434 ZDHHC12Q96GR4 267 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 FAM167BQ9BTA0 163 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 TFB2MQ9H5Q4 396 aaKnown RBP18.7■□□□□ 0.58
RTN4-207ENST00000402434 LATS2Q9NRM7 1088 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 GRHL1Q9NZI5 618 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 PISDQ9UG56 409 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 FBXO5Q9UKT4 447 aa18.7■□□□□ 0.58
RTN4-207ENST00000402434 CACNA1BQ00975 2339 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 OR5K3A6NET4 321 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 A8MU76 341 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 NVLO15381 856 aaKnown RBP18.69■□□□□ 0.58
RTN4-207ENST00000402434 FGF3P11487 239 aaPredicted RBP18.69■□□□□ 0.58
RTN4-207ENST00000402434 ETV5P41161 510 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 SLC1A2P43004 574 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 LEPRP48357 1165 aaKnown RBP18.69■□□□□ 0.58
RTN4-207ENST00000402434 CALCOCO2Q13137 446 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 TUBB2AQ13885 445 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 TBC1D21Q8IYX1 336 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 ZNF592Q92610 1267 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 TGM7Q96PF1 710 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 TUBB2BQ9BVA1 445 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 HRASLS2Q9NWW9 162 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 SEMA5BQ9P283 1151 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 ZC3H7BQ9UGR2 993 aaKnown RBP18.69■□□□□ 0.58
RTN4-207ENST00000402434 ASF1AQ9Y294 204 aa18.69■□□□□ 0.58
RTN4-207ENST00000402434 UTP11Q9Y3A2 253 aaKnown RBP18.69■□□□□ 0.58
RTN4-207ENST00000402434 PKD1L2Q7Z442 2459 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 KMT2BQ9UMN6 2715 aaPredicted RBP18.68■□□□□ 0.58
RTN4-207ENST00000402434 B4E171 279 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 AGRPO00253 132 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 PKMP14618 531 aaKnown RBP18.68■□□□□ 0.58
RTN4-207ENST00000402434 EIF2S3P41091 472 aaKnown RBP18.68■□□□□ 0.58
RTN4-207ENST00000402434 TSPAN7P41732 249 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 CSE1LP55060 971 aaKnown RBP18.68■□□□□ 0.58
RTN4-207ENST00000402434 TMED2Q15363 201 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 HP1BP3Q5SSJ5 553 aaPredicted RBP18.68■□□□□ 0.58
RTN4-207ENST00000402434 PLEKHS1Q5SXH7 462 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 STEAP4Q687X5 459 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 UNC5AQ6ZN44 842 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 OTOAQ7RTW8 1153 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 PRSS42Q7Z5A4 293 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 CNTN4Q8IWV2 1026 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 BMPERQ8N8U9 685 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 OR4E2Q8NGC2 313 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 OR5AR1Q8NGP9 310 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 OR5K2Q8NHB8 316 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 LCN9Q8WX39 176 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 RAB17Q9H0T7 212 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 DPH5Q9H2P9 285 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 KLHL3Q9UH77 587 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 POLG2Q9UHN1 485 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 ACSL6Q9UKU0 697 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 CHMP2BQ9UQN3 213 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 MRFAP1Q9Y605 127 aa18.68■□□□□ 0.58
RTN4-207ENST00000402434 A0A087WV48 116 aa18.67■□□□□ 0.58
RTN4-207ENST00000402434 NIPSNAP2O75323 286 aa18.67■□□□□ 0.58
RTN4-207ENST00000402434 ERVK-10P10266 1014 aa18.67■□□□□ 0.58
RTN4-207ENST00000402434 SLC5A2P31639 672 aa18.67■□□□□ 0.58
RTN4-207ENST00000402434 PCBP4P57723 403 aaKnown RBP18.67■□□□□ 0.58
RTN4-207ENST00000402434 PDIA2Q13087 525 aaKnown RBP18.67■□□□□ 0.58
RTN4-207ENST00000402434 PRKG2Q13237 762 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms