RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 GGA2Q9UJY4 613 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 GDAQ9Y2T3 454 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 NFE2L3Q9Y4A8 694 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 PTPRZ1P23471 2315 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 BPTFQ12830 3046 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FRYQ5TBA9 3013 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 LOC285556D6RIA3 1793 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 NBEAQ8NFP9 2946 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CCDC162PA2VCL2 907 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 OR14I1A6ND48 311 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FAM90A18PA6NE21 464 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FAM90A16PA6NEW6 464 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 TRPC5OSA6NMA1 111 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FAM90A9PA6NNJ1 464 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FAM90A5PA8MXJ8 464 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ZNF701M0R085 212 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 DCLK1O15075 740 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CLIC2O15247 247 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 DCXO43602 365 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 DNAJB5O75953 348 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 PDE9AO76083 593 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 GAS8O95995 478 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 AHSGP02765 367 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 AMY2AP04746 511 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 HMGN1P05114 100 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FAM90A15PP0C7V4 464 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FAM90A14PP0C7W9 464 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 C8orf89P0DMQ9 161 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 F3P13726 295 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CD19P15391 556 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 VCLP18206 1134 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ITIH2P19823 946 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 AMY2BP19961 511 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 RYKP34925 604 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 SERPINB6P35237 376 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CASRP41180 1078 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 RAP1GAPP47736 663 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 PCYT1AP49585 367 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CASP4P49662 377 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CDK7P50613 346 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ATP11AP98196 1134 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 GRIN1Q05586 938 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 TNK2Q07912 1038 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 MAB21L1Q13394 359 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 TMEM132BQ14DG7 1078 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 SF3B4Q15427 424 aaKnown RBP eCLIP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 PDK4Q16654 411 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ZXDCQ2QGD7 858 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CERKLQ49MI3 558 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 C4orf17Q53FE4 359 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 SLC44A4Q53GD3 710 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ZMAT1Q5H9K5 638 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 GNASQ5JWF2 1037 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 SPANXN2Q5MJ10 180 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 LDLRAP1Q5SW96 308 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CLEC6AQ6EIG7 209 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ZNF425Q6IV72 752 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CLEC17AQ6ZS10 378 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FRA10AC1Q70Z53 315 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 NDUFAF7Q7L592 441 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 VTCN1Q7Z7D3 282 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 C12orf40Q86WS4 652 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CDR2LQ86X02 465 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 CNGA4Q8IV77 575 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 FMR1NBQ8N0W7 255 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 RASGEF1AQ8N9B8 481 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 NDNFQ8TB73 568 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 SYTL5Q8TDW5 730 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 COPS5Q92905 334 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 RAD51AP1Q96B01 352 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 RRNAD1Q96FB5 475 aaKnown RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 OXNAD1Q96HP4 312 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ZNF558Q96NG5 402 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 TBC1D32Q96NH3 1257 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 NUP58Q9BVL2 599 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 SLC12A9Q9BXP2 914 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ADGRE3Q9BY15 652 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 DDX47Q9H0S4 455 aaKnown RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 LRMDAQ9H2I8 198 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 RIOX1Q9H6W3 641 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 NT5MQ9NPB1 228 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 PNPLA3Q9NST1 481 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 TDP1Q9NUW8 608 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 EURLQ9NYK6 297 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 WSB2Q9NYS7 404 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 PDP1Q9P0J1 537 aaPredicted RBP3.86□□□□□ -1.79
CLHC1-201ENST00000401408 ERVK-18Q9QC07 812 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 WNT16Q9UBV4 365 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 KCNN3Q9UGI6 736 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 IFT52Q9Y366 437 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 MFHAS1Q9Y4C4 1052 aa3.86□□□□□ -1.79
CLHC1-201ENST00000401408 RPAP1Q9BWH6 1393 aaPredicted RBP3.85□□□□□ -1.79
CLHC1-201ENST00000401408 FASNP49327 2511 aaKnown RBP3.85□□□□□ -1.79
CLHC1-201ENST00000401408 A0A0U1RQS6 177 aa3.85□□□□□ -1.79
CLHC1-201ENST00000401408 LOC390937A0A1W2PQ73 354 aa3.85□□□□□ -1.79
CLHC1-201ENST00000401408 GOLGA6L9A6NEM1 432 aa3.85□□□□□ -1.79
CLHC1-201ENST00000401408 OR6C70A6NIJ9 312 aa3.85□□□□□ -1.79
CLHC1-201ENST00000401408 SAC3D1A6NKF1 404 aa3.85□□□□□ -1.79
CLHC1-201ENST00000401408 OR2AG2A6NM03 316 aa3.85□□□□□ -1.79
CLHC1-201ENST00000401408 SNTNA6NMZ2 147 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms