RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 RAD9AQ99638 391 aa10.82□□□□□ -0.68
CACNA1C-216ENST00000399638 WDR18Q9BV38 432 aa10.82□□□□□ -0.68
CACNA1C-216ENST00000399638 DUSP16Q9BY84 665 aa10.82□□□□□ -0.68
CACNA1C-216ENST00000399638 MLXQ9UH92 298 aa10.82□□□□□ -0.68
CACNA1C-216ENST00000399638 RIPK2O43353 540 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 FAM153BP0C7A2 387 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 RBL1P28749 1068 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 VEGFBP49765 207 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 RAB28P51157 221 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 STRA6Q9BX79 667 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 IL22Q9GZX6 179 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 TMEM165Q9HC07 324 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 SORCS3Q9UPU3 1222 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 DDX3YO15523 660 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 KCNJ13O60928 360 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 PGAM2P15259 253 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 C1QTNF8P60827 252 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CDK18Q07002 472 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 FBXO46Q6PJ61 603 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 MCOLN2Q8IZK6 566 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF433Q8N7K0 673 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 NETO2Q8NC67 525 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF471Q9BX82 626 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 SEMA4AQ9H3S1 761 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 RIOX1Q9H6W3 641 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CNOT6Q9ULM6 557 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 DIP2BQ9P265 1576 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ENTPD5O75356 428 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 OTCP00480 354 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ITGA2P17301 1181 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 NDUFS1P28331 727 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 TGFBR2P37173 567 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 EIF1AXP47813 144 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ENTPD1P49961 510 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 MAZP56270 477 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 SCUBE1Q8IWY4 988 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 SVOPQ8N4V2 548 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 GALNT11Q8NCW6 608 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 PSMA8Q8TAA3 256 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 SFXN1Q9H9B4 322 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 H3BQ06 376 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF20P17024 532 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 NPR2P20594 1047 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CHRNB4P30926 498 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 MNDAP41218 407 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CDH15P55291 814 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ADAMTSL2Q86TH1 951 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 DNAAF5Q86Y56 855 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 C11orf65Q8NCR3 313 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 NLGN4YQ8NFZ3 816 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 PCDH19Q8TAB3 1148 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 FNIP1Q8TF40 1166 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 LRRN4Q8WUT4 740 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 AZIN2Q96A70 460 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 EPYCQ99645 322 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 J3QRK9 145 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 KRT36O76013 467 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 MED26O95402 600 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 STATHP02808 62 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CREB1P16220 341 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 PLA2G16P53816 162 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CASP7P55210 303 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 MRPS5P82675 430 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 MZT2BQ6NZ67 158 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 STK32CQ86UX6 486 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CROCCP3Q8IVE0 287 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 S100PBPQ96BU1 408 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 IFT80Q9P2H3 777 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 WASF3Q9UPY6 502 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CHD2O14647 1828 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ABHD2P08910 425 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 FASP25445 335 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 MAGEA6P43360 314 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 ENPEPQ07075 957 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CAPSQ13938 189 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 CYP2R1Q6VVX0 501 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 OR2L8Q8NGY9 312 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 HLA-CQ95604 372 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 EBF2Q9HAK2 575 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 IFT46Q9NQC8 304 aa10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 OAS3Q9Y6K5 1087 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-216ENST00000399638 KNDC1Q76NI1 1749 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 EDDM13A0A1B0GTR0 161 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 QPRTQ15274 297 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 MBLAC2Q68D91 279 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 GPRIN3Q6ZVF9 776 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CLVS1Q8IUQ0 354 aaPredicted RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PPP3R2Q96LZ3 170 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PRDM12Q9H4Q4 367 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PLGRKTQ9HBL7 147 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PFDN2Q9UHV9 154 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 KLRG2A4D1S0 409 aaPredicted RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 G3V2T6 193 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CBFA2T3O75081 653 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CSKP41240 450 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ECT2LQ008S8 904 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 INO80DQ53TQ3 878 aaPredicted RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SPIN3Q5JUX0 258 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SNX32Q86XE0 403 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms