RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GLB1P16278 677 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ATP5DP30049 168 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DAB2P98082 770 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PLOD1Q02809 727 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 HHEXQ03014 270 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GRB7Q14451 532 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TMED2Q15363 201 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TRIP6Q15654 476 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KLHL38Q2WGJ6 581 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 EFL1Q7Z2Z2 1120 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CMC1Q7Z7K0 106 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLCO6A1Q86UG4 719 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 OR5AR1Q8NGP9 310 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 IFI44Q8TCB0 444 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ANKRD49Q8WVL7 239 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 UBLCP1Q8WVY7 318 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ASZ1Q8WWH4 475 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 INPP5DQ92835 1189 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TMEM159Q96B96 161 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CDC6Q99741 560 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RTKNQ9BST9 563 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC40A1Q9NP59 571 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 POT1Q9NUX5 634 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TAS2R13Q9NYV9 303 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 LRIT1Q9P2V4 623 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC39A10Q9ULF5 831 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CPED1A4D0V7 1026 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KRT87PA6NCN2 255 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 POC1B-GALNT4F8VUJ3 575 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KPNA5O15131 536 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PHGDHO43175 533 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KCNK5O95279 499 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MATN4O95460 622 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TUBBP07437 444 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CEACAM1P13688 526 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ZNF37AP17032 561 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SAT1P21673 171 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SPRP35270 261 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 HALP42357 657 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RPIAP49247 311 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NOVA1P51513 510 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ABRQ12979 859 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GPR18Q14330 331 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PIWIL4Q7Z3Z4 852 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC9B2Q86UD5 537 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 OR2W6PQ8NHA6 318 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 EEF1AKMT1Q8WVE0 214 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TFGQ92734 400 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CXorf40BQ96DE9 158 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 EURLQ9NYK6 297 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NCKIPSDQ9NZQ3 722 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TXNDC16Q9P2K2 825 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CTNNAL1Q9UBT7 734 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TRMT6Q9UJA5 497 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ZNF180Q9UJW8 692 aa12.1□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 A0A1W2PQM1 296 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 LILRA5A6NI73 299 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 B4GAT1O43505 415 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 VIPP01282 170 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ALDOAP04075 364 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NUDT17P0C025 328 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PNLIPP16233 465 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MAGEA12P43365 314 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 BDKRB1P46663 353 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 POU4F1Q01851 419 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CFHR1Q03591 330 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 USP10Q14694 798 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CCSMST1Q4G0I0 132 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MROH9Q5TGP6 573 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NEK10Q6ZWH5 1172 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SPRED1Q7Z699 444 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MZB1Q8WU39 189 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DLG3Q92796 817 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NAT6Q93015 286 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ISL2Q96A47 359 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 LINGO1Q96FE5 620 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CCDC3Q9BQI4 270 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 HGH1Q9BTY7 390 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MENTQ9BUN1 341 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TWSG1Q9GZX9 223 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC32A1Q9H598 525 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KIR3DX1Q9H7L2 352 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 UCK1Q9HA47 277 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 POPDC3Q9HBV1 291 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 OGFRQ9NZT2 677 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC24A2Q9UI40 661 aa12.09□□□□□ -0.47
HLA-DQB1-203ENST00000399082 IGHV1OR21-1A0A087WYE8 117 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CCDC151A5D8V7 595 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RHPN2P1A8MT19 583 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms