RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PPP1R7Q15435 360 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 TMEM164Q5U3C3 297 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 KLHL35Q6PF15 583 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 FAM92BQ6ZTR7 304 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 VRK3Q8IV63 474 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 SLC22A15Q8IZD6 547 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 LPGAT1Q92604 370 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 SLC41A2Q96JW4 573 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 FERD3LQ96RJ6 166 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 TFB2MQ9H5Q4 396 aaKnown RBP16.25■□□□□ 0.19
APTR-201ENST00000398043 APMAPQ9HDC9 416 aa16.25■□□□□ 0.19
APTR-201ENST00000398043 RALYQ9UKM9 306 aaKnown RBP16.25■□□□□ 0.19
APTR-201ENST00000398043 OR6C74A6NCV1 312 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 GOLGA8KD6RF30 607 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 GOLGA8TH3BQL2 631 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 IFRD1O00458 451 aaPredicted RBP16.24■□□□□ 0.19
APTR-201ENST00000398043 TP73O15350 636 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 SLCO2B1O94956 709 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 NELFEP18615 380 aaKnown RBP16.24■□□□□ 0.19
APTR-201ENST00000398043 ADARP55265 1226 aaKnown RBP16.24■□□□□ 0.19
APTR-201ENST00000398043 SH3BP2P78314 561 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 BRD3Q15059 726 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 PLCL1Q15111 1095 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 CTSL3PQ5NE16 218 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 CACHD1Q5VU97 1274 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 IRGCQ6NXR0 463 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 CENPUQ71F23 418 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 HOOK3Q86VS8 718 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 LRRC6Q86X45 466 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 CILP2Q8IUL8 1156 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 KRT222Q8N1A0 295 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 OR52E1Q8NGJ3 308 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 OR5AR1Q8NGP9 310 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 TEFMQ96QE5 360 aaKnown RBP16.24■□□□□ 0.19
APTR-201ENST00000398043 TCF12Q99081 682 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 CD180Q99467 661 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 MAP3K3Q99759 626 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 ASPSCR1Q9BZE9 553 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 HRASLS2Q9NWW9 162 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 IL1RAPL1Q9NZN1 696 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 RNF14Q9UBS8 474 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 ATMQ13315 3056 aa16.24■□□□□ 0.19
APTR-201ENST00000398043 CCDC88CQ9P219 2028 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 TLCD2A6NGC4 264 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 F8W8V4 182 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 CCDC188H7C350 402 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 BTN3A3O00478 584 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 USP1O94782 785 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 ITGB6P18564 788 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 OGNP20774 298 aaKnown RBP16.23■□□□□ 0.19
APTR-201ENST00000398043 SEPHS1P49903 392 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 KPNA2P52292 529 aaKnown RBP16.23■□□□□ 0.19
APTR-201ENST00000398043 SRSF6Q13247 344 aaKnown RBP16.23■□□□□ 0.19
APTR-201ENST00000398043 DHX34Q14147 1143 aaKnown RBP16.23■□□□□ 0.19
APTR-201ENST00000398043 MSS51Q4VC12 460 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 ZNF789Q5FWF6 425 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 DCAF12Q5T6F0 453 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 MRNIPQ6NTE8 343 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 NEPROQ6NW34 567 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 CASC4Q6P4E1 433 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 ZNF449Q6P9G9 518 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 SYDE1Q6ZW31 735 aaPredicted RBP16.23■□□□□ 0.19
APTR-201ENST00000398043 OOSP2Q86WS3 158 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 KLHL7Q8IXQ5 586 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 TBC1D21Q8IYX1 336 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 OR4E2Q8NGC2 313 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 UBXN4Q92575 508 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 ZNF669Q96BR6 464 aaPredicted RBP16.23■□□□□ 0.19
APTR-201ENST00000398043 CTRCQ99895 268 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 CPNE5Q9HCH3 593 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 SAMD15Q9P1V8 674 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 ASIC3Q9UHC3 531 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 GNPTGQ9UJJ9 305 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 PILRAQ9UKJ1 303 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 POMT2Q9UKY4 750 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 RPS6KL1Q9Y6S9 549 aa16.23■□□□□ 0.19
APTR-201ENST00000398043 STMND1H3BQB6 276 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 BTN3A1O00481 513 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 NDUFS3O75489 264 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 S1PR4O95977 384 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 PAMP19021 973 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 UCNP55089 124 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 TMPRSS3P57727 454 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 ETF1P62495 437 aaKnown RBP16.22■□□□□ 0.19
APTR-201ENST00000398043 DR1Q01658 176 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 PRKG2Q13237 762 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 GBX1Q14549 363 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 BROXQ5VW32 411 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 CEACAM20Q6UY09 585 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 PCGF5Q86SE9 256 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 KMT5CQ86Y97 462 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 ADGRF3Q8IZF5 1079 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 CARFQ8N187 725 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 OR5K2Q8NHB8 316 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 ASZ1Q8WWH4 475 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 LCN9Q8WX39 176 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 NKD1Q969G9 470 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 PPM1MQ96MI6 270 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 RUNDC3BQ96NL0 473 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 CCNL2Q96S94 520 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms