RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 GPIP06744 558 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ACRV1P26436 265 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CD70P32970 193 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RGS4P49798 205 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 EMX2Q04743 252 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RAB33AQ14088 237 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PTGR1Q14914 329 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CDKN3Q16667 212 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DLEU7Q6UYE1 221 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TMIGD2Q96BF3 282 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ARPC5LQ9BPX5 153 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TSC22D4Q9Y3Q8 395 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SH3PXD2BA1X283 911 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ACOX3O15254 700 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SEC24DO94855 1032 aaPredicted RBP18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SLC2A4P14672 509 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GJA1P17302 382 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GABRR2P28476 465 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 EEFSECP57772 596 aaKnown RBP18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RPL38P63173 70 aaKnown RBP18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HMGCS1Q01581 520 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LMAN2Q12907 356 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SGO1Q5FBB7 561 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DGKKQ5KSL6 1271 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HID1Q8IV36 788 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FIBCD1Q8N539 461 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ADI1Q9BV57 179 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 WWOXQ9NZC7 414 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SELENONQ9NZV5 590 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ANAPC2Q9UJX6 822 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ANGPTL3Q9Y5C1 460 aa18.01■□□□□ 0.47
CHRFAM7A-202ENST00000397827 NRG2O14511 850 aaPredicted RBP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 EI24O14681 340 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ANKRD28O15084 1053 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZNF821O75541 412 aaPredicted RBP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ENO2P09104 434 aaPredicted RBP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DGKAP23743 735 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 STK19P49842 368 aaPredicted RBP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CLCN2P51788 898 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PYCR3Q53H96 274 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SLC39A11Q8N1S5 342 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZBTB2Q8N680 514 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ISG20Q96AZ6 181 aaKnown RBP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 BIRC7Q96CA5 298 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LRRC3Q9BY71 257 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LATS2Q9NRM7 1088 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PADI4Q9UM07 663 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 OARD1Q9Y530 152 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 NPIPB15A6NHN6 443 aaPredicted RBP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CBFA2T3O75081 653 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LATS1O95835 1130 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 URODP06132 367 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RPS3P23396 243 aaKnown RBP eCLIP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RFC2P35250 354 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CTSOP43234 321 aaPredicted RBP18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GAREM2Q75VX8 874 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MFSD2AQ8NA29 543 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GOLM1Q8NBJ4 401 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZNF558Q96NG5 402 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZFP14Q9HCL3 533 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CFAP97Q9P2B7 532 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FADS3Q9Y5Q0 445 aa18■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GLUD1P00367 558 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MERTKQ12866 999 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ATP6AP1Q15904 470 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SPATS1Q496A3 300 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GPRC6AQ5T6X5 926 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GLYATQ6IB77 296 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GPR26Q8NDV2 337 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 C9orf16Q9BUW7 83 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MRPL17Q9NRX2 175 aaKnown RBP17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 OPTCQ9UBM4 332 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 KLQ9UEF7 1012 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 INTS6Q9UL03 887 aaKnown RBP17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CCL27Q9Y4X3 112 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 OLFM2O95897 454 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TFPTP0C1Z6 253 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GGT5P36269 586 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 STT3AP46977 705 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ADRM1Q16186 407 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CROCCP3Q8IVE0 287 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TCEAL8Q8IYN2 117 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HS6ST3Q8IZP7 471 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZNF296Q8WUU4 475 aaPredicted RBP17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CYGBQ8WWM9 190 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ACDQ96AP0 544 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FBXL20Q96IG2 436 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RNF145Q96MT1 663 aa17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SMG9Q9H0W8 520 aaKnown RBP17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SOX17Q9H6I2 414 aaPredicted RBP17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TUBA8Q9NY65 449 aaPredicted RBP17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 KIAA1522Q9P206 1035 aaPredicted RBP17.99■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MYOFQ9NZM1 2061 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TRBV5-4A0A0C4DH59 114 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TEX28O15482 410 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HTR1EP28566 365 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TMED10P49755 219 aaKnown RBP17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 C16orf72Q14CZ0 275 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 AASDHQ4L235 1098 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms