RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GPRC6AQ5T6X5 926 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 KDELC1Q6UW63 502 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 FAM83HQ6ZRV2 1179 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF295-AS1Q8N0V1 137 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 ENDOVQ8N8Q3 282 aaKnown RBP8.52□□□□□ -1.05
CAPN3-208ENST00000397204 FDCSPQ8NFU4 85 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 GPR150Q8NGU9 434 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 OR2L2Q8NH16 312 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 SLC35G2Q8TBE7 412 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF398Q8TD17 642 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 IP6K3Q96PC2 410 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 SMAD5Q99717 465 aaKnown RBP8.52□□□□□ -1.05
CAPN3-208ENST00000397204 DPH2Q9BQC3 489 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-208ENST00000397204 CCM2Q9BSQ5 444 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 CASS4Q9NQ75 786 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 C1GALT1Q9NS00 363 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 SLC24A2Q9UI40 661 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 SERTAD3Q9UJW9 196 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 SNX7Q9UNH6 387 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 PKP3Q9Y446 797 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 HEBP2Q9Y5Z4 205 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 CNTRLQ7Z7A1 2325 aa8.52□□□□□ -1.05
CAPN3-208ENST00000397204 POLQO75417 2590 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SLC9B1P1A6NJY1 282 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 OR2AG2A6NM03 316 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 IGHEP01854 428 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 HBQ1P09105 142 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 POLR2CP19387 275 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 HLA-DPA1P20036 260 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 CDH3P22223 829 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 PTPN3P26045 913 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 CD68P34810 354 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 RORAP35398 523 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 HADHAP40939 763 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 KPNA2P52292 529 aaKnown RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 ITGA1P56199 1179 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 TFDP2Q14188 446 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 KRT33BQ14525 404 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 PRKD1Q15139 912 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SLC1A5Q15758 541 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 FNBP1LQ5T0N5 605 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 FAM182AQ5T1J6 154 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 LCN10Q6JVE6 187 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 NPNTQ6UXI9 565 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 FAM151BQ6UXP7 276 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 MAMDC2Q7Z304 686 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 RFX6Q8HWS3 928 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SLC25A41Q8N5S1 370 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 ZBTB2Q8N680 514 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 RBMXL3Q8N7X1 1067 aaKnown RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 Q8NA96 180 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 OR4E2Q8NGC2 313 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 TFB1MQ8WVM0 346 aaKnown RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 CLIP3Q96DZ5 547 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SGSM3Q96HU1 749 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 LINC00615Q96LM1 132 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 C12orf66Q96MD2 445 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 VAT1Q99536 393 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 C17orf62Q9BQA9 187 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 NUDT9Q9BW91 350 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 PACSIN1Q9BY11 444 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 WWP1Q9H0M0 922 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 FANCEQ9HB96 536 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SMOXQ9NWM0 555 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SOHLH2Q9NX45 425 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 DDX56Q9NY93 547 aaKnown RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 GPR83Q9NYM4 423 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 UBP1Q9NZI7 540 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 CFAP20Q9Y6A4 193 aaKnown RBP8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SPTBP11277 2137 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 SHANK1Q9Y566 2161 aa8.51□□□□□ -1.05
CAPN3-208ENST00000397204 C17orf113A0A1B0GUU1 675 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 A6NL46 340 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 C2orf81A6NN90 581 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 GAPDHSO14556 408 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 STX7O15400 261 aaKnown RBP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 CBX6O95503 412 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 GYPCP04921 128 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 CD63P08962 238 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 SLC35G4P0C7Q5 338 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 NFKB1P19838 968 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 AGXTP21549 392 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 PRDX3P30048 256 aaKnown RBP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 SLC1A1P43005 524 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 PREPP48147 710 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 WASHC5Q12768 1159 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 MPP3Q13368 585 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 NOMO1Q15155 1222 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 TAZQ16635 292 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 ASTE1Q2TB18 679 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 PLEKHN1Q494U1 663 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 BCL7AQ4VC05 210 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 PRAMEF17Q5VTA0 474 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF385CQ66K41 422 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 SLC6A19Q695T7 634 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 IGFL3Q6UXB1 125 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 B4GALNT4Q76KP1 1039 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 PID1Q7Z2X4 250 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 GLT6D1Q7Z4J2 308 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms