RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KLHL2O95198 593 aa13□□□□□ -0.33
SEC13-209ENST00000397117 LTA4HP09960 611 aaKnown RBP13□□□□□ -0.33
SEC13-209ENST00000397117 CKMT2P17540 419 aa13□□□□□ -0.33
SEC13-209ENST00000397117 ITGB6P18564 788 aa13□□□□□ -0.33
SEC13-209ENST00000397117 TIAL1Q01085 375 aaKnown RBP eCLIP13□□□□□ -0.33
SEC13-209ENST00000397117 TMEM115Q12893 351 aaPredicted RBP13□□□□□ -0.33
SEC13-209ENST00000397117 GTF2H3Q13889 308 aa13□□□□□ -0.33
SEC13-209ENST00000397117 CSHL1Q14406 222 aa13□□□□□ -0.33
SEC13-209ENST00000397117 INPP5AQ14642 412 aa13□□□□□ -0.33
SEC13-209ENST00000397117 ZNF648Q5T619 568 aaPredicted RBP13□□□□□ -0.33
SEC13-209ENST00000397117 LVRNQ6Q4G3 990 aa13□□□□□ -0.33
SEC13-209ENST00000397117 PCSK4Q6UW60 755 aa13□□□□□ -0.33
SEC13-209ENST00000397117 CDHR3Q6ZTQ4 885 aa13□□□□□ -0.33
SEC13-209ENST00000397117 CLEC14AQ86T13 490 aa13□□□□□ -0.33
SEC13-209ENST00000397117 HEATR4Q86WZ0 1026 aa13□□□□□ -0.33
SEC13-209ENST00000397117 PLD6Q8N2A8 252 aaKnown RBP13□□□□□ -0.33
SEC13-209ENST00000397117 OXR1Q8N573 874 aa13□□□□□ -0.33
SEC13-209ENST00000397117 SIDT2Q8NBJ9 832 aaKnown RBP13□□□□□ -0.33
SEC13-209ENST00000397117 TP53I13Q8NBR0 393 aaPredicted RBP13□□□□□ -0.33
SEC13-209ENST00000397117 NAT14Q8WUY8 206 aa13□□□□□ -0.33
SEC13-209ENST00000397117 KCTD4Q8WVF5 259 aa13□□□□□ -0.33
SEC13-209ENST00000397117 SGF29Q96ES7 293 aa13□□□□□ -0.33
SEC13-209ENST00000397117 SCYL1Q96KG9 808 aa13□□□□□ -0.33
SEC13-209ENST00000397117 WDR26Q9H7D7 661 aa13□□□□□ -0.33
SEC13-209ENST00000397117 TRIM39Q9HCM9 518 aa13□□□□□ -0.33
SEC13-209ENST00000397117 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
SEC13-209ENST00000397117 SLC17A7Q9P2U7 560 aa13□□□□□ -0.33
SEC13-209ENST00000397117 TEX51A0A1B0GUA7 166 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 BRINP1O60477 761 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CDK14O94921 469 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ASMTLO95671 621 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 FTH1P02794 183 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ZNF37AP17032 561 aaPredicted RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 TEAD1P28347 426 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 GMPRP36959 345 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 MDH1P40925 334 aaKnown RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 CLCN7P51798 805 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 IL2P60568 153 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 GUCY1A3Q02108 690 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CCDC153Q494R4 210 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 KHDC1Q4VXA5 237 aaKnown RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 PAQR3Q6TCH7 311 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 OTOAQ7RTW8 1153 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 GPR155Q7Z3F1 870 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 TRIM74Q86UV6 250 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CENPLQ8N0S6 344 aaPredicted RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 SPATA6LQ8N4H0 392 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 NKAPQ8N5F7 415 aaKnown RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 DCBLD1Q8N8Z6 715 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 DENND1AQ8TEH3 1009 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 INPP5DQ92835 1189 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CENPTQ96BT3 561 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CAPS2Q9BXY5 557 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 OR2AG1Q9H205 316 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 C12orf65Q9H3J6 166 aaKnown RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 NMRAL1Q9HBL8 299 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 PHPT1Q9NRX4 125 aaPredicted RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 MED16Q9Y2X0 877 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 DHRS7Q9Y394 339 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 LRRK1Q38SD2 2015 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 A6NNZ2 444 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 VEGFDO43915 354 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 APOA4P06727 396 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ACP1P24666 158 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 GLRBP48167 497 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CDK3Q00526 305 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 INSM1Q01101 510 aaPredicted RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 TLE3Q04726 772 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 TERF2Q15554 542 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 TTLL9Q3SXZ7 439 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 TUBB8Q3ZCM7 444 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 TTC19Q6DKK2 380 aaPredicted RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 C16orf46Q6P387 395 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ZNF605Q86T29 641 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 IQCHQ86VS3 1027 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ZBTB2Q8N680 514 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 RASGEF1AQ8N9B8 481 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 DENND6BQ8NEG7 585 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CD200R1Q8TD46 325 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 NXNL1Q96CM4 212 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ZNF514Q96K75 400 aaPredicted RBP12.99□□□□□ -0.33
SEC13-209ENST00000397117 UBXN10Q96LJ8 280 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 FZD3Q9NPG1 666 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 IGSF5Q9NSI5 407 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 ZNF358Q9NW07 568 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 PSD3Q9NYI0 1048 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 TMEM216Q9P0N5 145 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 GALPQ9UBC7 116 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 CLCA2Q9UQC9 943 aa12.99□□□□□ -0.33
SEC13-209ENST00000397117 FPGTO14772 594 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 KPNA5O15131 536 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 RAD51BO15315 384 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 PLIN3O60664 434 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 SHOX2O60902 331 aaPredicted RBP12.98□□□□□ -0.33
SEC13-209ENST00000397117 WISP3O95389 354 aaPredicted RBP12.98□□□□□ -0.33
SEC13-209ENST00000397117 NEFHP12036 1026 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms