RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 PITPNM3Q9BZ71 974 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 HEATR5BQ9P2D3 2071 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 A0A1W2PQM1 296 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 CFAP99D6REC4 459 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 ACSL3O95573 720 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 ANKRD34CP0C6C1 535 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 CD1CP29017 333 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 PKLRP30613 574 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 CSF2RBP32927 897 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 PHBP35232 272 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 PPARGP37231 505 aaPredicted RBP10.33□□□□□ -0.76
NUP98-205ENST00000397007 IL9RQ01113 521 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 PRAMEF14Q5SWL7 426 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 PAQR3Q6TCH7 311 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 ZNF574Q6ZN55 896 aaPredicted RBP10.33□□□□□ -0.76
NUP98-205ENST00000397007 ISCA2Q86U28 154 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 GATAD2AQ86YP4 633 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 SLITRK4Q8IW52 837 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 TBC1D21Q8IYX1 336 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 RHEBL1Q8TAI7 183 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.33□□□□□ -0.76
NUP98-205ENST00000397007 TLCD1Q96CP7 247 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 NDNQ99608 321 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 WWP1Q9H0M0 922 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 VIPAS39Q9H9C1 493 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 SSU72Q9NP77 194 aaKnown RBP10.33□□□□□ -0.76
NUP98-205ENST00000397007 KCNK6Q9Y257 313 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 AKAP13Q12802 2813 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 PCSK5Q92824 1860 aa10.33□□□□□ -0.76
NUP98-205ENST00000397007 A0A1W2PNU3 283 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 NDUFS3O75489 264 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 ENO3P13929 434 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 PREPP48147 710 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 THOC5Q13769 683 aaKnown RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 WDR74Q6RFH5 385 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 CRTC3Q6UUV7 619 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 CHST15Q7LFX5 561 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 TAS2R42Q7RTR8 314 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 RAB44Q7Z6P3 723 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 SLCO6A1Q86UG4 719 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 ADGRF3Q8IZF5 1079 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 OR6C4Q8NGE1 309 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 LMX1AQ8TE12 382 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 RTKNQ9BST9 563 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 NCDNQ9UBB6 729 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 MDC1Q14676 2089 aaKnown RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 SDC3O75056 442 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 CEACAM1P13688 526 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 KCNA4P22459 653 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 SLC6A12P48065 614 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 SERPINB9P50453 376 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 EIF3BP55884 814 aaKnown RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 RAB10P61026 200 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 SMAD1Q15797 465 aaKnown RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 SPDYE1Q8NFV5 336 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 ACMSDQ8TDX5 336 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 EEF1AKMT1Q8WVE0 214 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 MTBPQ96DY7 904 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 PRR11Q96HE9 360 aaPredicted RBP10.32□□□□□ -0.76
NUP98-205ENST00000397007 SARGQ9BW04 601 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 MVB12BQ9H7P6 319 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 SNX15Q9NRS6 342 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 CPNE7Q9UBL6 633 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 ZNHIT2Q9UHR6 403 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 ARHGEF33A8MVX0 844 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 TNFSF14O43557 240 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 TYROBPO43914 113 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 SH3BP5O60239 455 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 EPORP19235 508 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 MAPK9P45984 424 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 NFKB2Q00653 900 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 DEFB133Q30KQ1 61 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 CCSMST1Q4G0I0 132 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 FBXO38Q6PIJ6 1188 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 CARFQ8N187 725 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 PDPRQ8NCN5 879 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 ASZ1Q8WWH4 475 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 NRTNQ99748 197 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 CTNNAL1Q9UBT7 734 aa10.32□□□□□ -0.76
NUP98-205ENST00000397007 SASH3O75995 380 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 ENO2P09104 434 aaPredicted RBP10.31□□□□□ -0.76
NUP98-205ENST00000397007 COL6A2P12110 1019 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 CKMT2P17540 419 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 ILF3Q12906 894 aaKnown RBP eCLIP10.31□□□□□ -0.767e-12■■■■■ 47.5
NUP98-205ENST00000397007 C1orf61Q13536 156 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 ZNF460Q14592 562 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 PLA2G4EQ3MJ16 856 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 TRAPPC5Q8IUR0 188 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 PLD6Q8N2A8 252 aaKnown RBP10.31□□□□□ -0.76
NUP98-205ENST00000397007 PGM2Q96G03 612 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 ZNF285Q96NJ3 590 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 SGPP1Q9BX95 441 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 OARD1Q9Y530 152 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 RP1P56715 2156 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 IGHV1OR21-1A0A087WYE8 117 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 RASGRF2O14827 1237 aa10.31□□□□□ -0.76
NUP98-205ENST00000397007 SPRP35270 261 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms