RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ZNF711Q9Y462 761 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 USP9YO00507 2555 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 LOC285095A0A1B0GVY8 99 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 MAGEB16A2A368 324 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 LILRA5A6NI73 299 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 CAPN5O15484 640 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-202ENST00000396828 AVILO75366 819 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 UBXN7O94888 489 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 TIAF1O95411 115 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 ZNF7P17097 686 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-202ENST00000396828 HLA-DPA1P20036 260 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 PHBP35232 272 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 ADRA1AP35348 466 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 GRIA1P42261 906 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 MAGEA3P43357 314 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 CLCNKAP51800 687 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 SESN2P58004 480 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-202ENST00000396828 FOXM1Q08050 763 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 ABHD18Q0P651 414 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 CBLBQ13191 982 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 SLC1A5Q15758 541 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 INSCQ1MX18 579 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 ATP13A5Q4VNC0 1218 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 CCDC38Q502W7 563 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 ARMC3Q5W041 872 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 CASC4Q6P4E1 433 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 RANBP10Q6VN20 620 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 ZNF534Q76KX8 674 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 HDXQ7Z353 690 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 TMEM135Q86UB9 458 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 PALM2Q8IXS6 379 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 MREGQ8N565 214 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 SLC25A41Q8N5S1 370 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 TRAM1L1Q8N609 369 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 GALNT6Q8NCL4 622 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 OR6C1Q96RD1 312 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 APOL2Q9BQE5 337 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 NAT9Q9BTE0 207 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-202ENST00000396828 IL22Q9GZX6 179 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 AKIRIN1Q9H9L7 192 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-202ENST00000396828 MAGEE1Q9HCI5 957 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 MAD1L1Q9Y6D9 718 aa10.12□□□□□ -0.79
NEDD8-202ENST00000396828 OR5K4A6NMS3 321 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 PDZK1P1A8MUH7 402 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 NDST3O95803 873 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 VIPP01282 170 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ANKRD34CP0C6C1 535 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 MGAT1P26572 445 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 DLSTP36957 453 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ELK3P41970 407 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 DCDC1P59894 354 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 FOXK1P85037 733 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 OLIG2Q13516 323 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 LAMB3Q13751 1172 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 GPR18Q14330 331 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 MSS51Q4VC12 460 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 SIRPB2Q5JXA9 342 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 HP1BP3Q5SSJ5 553 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ABRAXAS1Q6UWZ7 409 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 CERS6Q6ZMG9 384 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 FAM92BQ6ZTR7 304 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 PLXDC1Q8IUK5 500 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ANKMY2Q8IV38 441 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 FBXO36Q8NEA4 188 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 PPHLN1Q8NEY8 458 aaKnown RBP10.11□□□□□ -0.79
NEDD8-202ENST00000396828 C9orf43Q8TAL5 461 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-202ENST00000396828 NAT14Q8WUY8 206 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 STAMBPL1Q96FJ0 436 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 CATSPER2Q96P56 530 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 RUFY1Q96T51 708 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ZPBPQ9BS86 351 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ZSCAN5AQ9BUG6 496 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 TXLNGYQ9BZA5 131 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 GPR63Q9BZJ6 419 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ULBP3Q9BZM4 244 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 CDC42EP4Q9H3Q1 356 aaKnown RBP10.11□□□□□ -0.79
NEDD8-202ENST00000396828 STN1Q9H668 368 aaKnown RBP10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ARNT2Q9HBZ2 717 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 SLC40A1Q9NP59 571 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 NFKBIL1Q9UBC1 381 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-202ENST00000396828 ZC3H7BQ9UGR2 993 aaKnown RBP10.11□□□□□ -0.79
NEDD8-202ENST00000396828 TUBD1Q9UJT1 453 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 CROTQ9UKG9 612 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 TEX264Q9Y6I9 313 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 RPS6KL1Q9Y6S9 549 aa10.11□□□□□ -0.79
NEDD8-202ENST00000396828 KMOO15229 486 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 BUD23O43709 281 aaKnown RBP10.1□□□□□ -0.79
NEDD8-202ENST00000396828 UGT1A9O60656 530 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 BANF1O75531 89 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 SPAG6O75602 509 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 KIAA0754O94854 1291 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 CDK14O94921 469 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 TTC4O95801 387 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 POLBP06746 335 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 GSTA2P09210 222 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 SLC2A4P14672 509 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 PGAM1P18669 254 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 UGT1A6P19224 532 aa10.1□□□□□ -0.79
NEDD8-202ENST00000396828 TCN2P20062 427 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms