RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SLC9B1Q4ZJI4 515 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 LACTB2Q53H82 288 aaPredicted RBP12.43□□□□□ -0.42
TRIM39-204ENST00000396548 SPDYAQ5MJ70 313 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 SH2D4BQ5SQS7 431 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 FAM91A1Q658Y4 838 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 GCNT7Q6ZNI0 430 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 FRA10AC1Q70Z53 315 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 TRAPPC5Q8IUR0 188 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 TMEM145Q8NBT3 493 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 HM13Q8TCT9 377 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 CD244Q9BZW8 370 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 DPEP2Q9H4A9 486 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 TM7SF3Q9NS93 570 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 EIF2B4Q9UI10 523 aaKnown RBP12.43□□□□□ -0.42
TRIM39-204ENST00000396548 ANKRD12Q6UB98 2062 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 POM121BA6NF01 834 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 ARHGEF33A8MVX0 844 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 SLCO1B7G3V0H7 640 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 OR7A17O14581 309 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 TSPAN8P19075 237 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 RPS9P46781 194 aaKnown RBP12.43□□□□□ -0.42
TRIM39-204ENST00000396548 RPIAP49247 311 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 LCP2Q13094 533 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 GTF2H3Q13889 308 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 KANK2Q63ZY3 851 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 ANKS6Q68DC2 871 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 LRRTM4Q86VH4 590 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 ESAMQ96AP7 390 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 PRR11Q96HE9 360 aaPredicted RBP12.43□□□□□ -0.42
TRIM39-204ENST00000396548 TBC1D17Q9HA65 648 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 CD320Q9NPF0 282 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 PHPT1Q9NRX4 125 aaPredicted RBP12.43□□□□□ -0.42
TRIM39-204ENST00000396548 KLC4Q9NSK0 619 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 HEY2Q9UBP5 337 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 PRKAB1Q9Y478 270 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 TNPO3Q9Y5L0 923 aaKnown RBP12.43□□□□□ -0.42
TRIM39-204ENST00000396548 LRRC72A6NJI9 287 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 SNX2O60749 519 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 SEMA4FO95754 770 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 VCANP13611 3396 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 EPORP19235 508 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 NFE2L1Q14494 772 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 METRNLQ641Q3 311 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 ALYREFQ86V81 257 aaKnown RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 CFAP206Q8IYR0 622 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 TMEM159Q96B96 161 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 HHIPQ96QV1 700 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 C6orf106Q9H6K1 298 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 RMI1Q9H9A7 625 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 MEAF6Q9HAF1 191 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 USP34Q70CQ2 3546 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 SLC31A1O15431 190 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 SERPINB3P29508 390 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 INHBCP55103 352 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 FOXA1P55317 472 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 RPA4Q13156 261 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 SYTL3Q4VX76 610 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 TPRG1LQ5T0D9 272 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 TTC23LQ6PF05 361 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 DOK6Q6PKX4 331 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 CRTC3Q6UUV7 619 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 GOLGA7Q7Z5G4 137 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 SYVN1Q86TM6 617 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 MTDHQ86UE4 582 aaKnown RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 FRMD1Q8N878 549 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 TRPC4APQ8TEL6 797 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 WWP1Q9H0M0 922 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 GPR27Q9NS67 375 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 FBXL21Q9UKT6 434 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 PNMA8BQ9ULN7 279 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 TRAF6Q9Y4K3 522 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 KMOO15229 486 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 DCTN3O75935 186 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 GUCA1CO95843 209 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 HNRNPA2B1P22626 353 aaKnown RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 PBLDP30039 288 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 PRDX3P30048 256 aaKnown RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 OXTRP30559 389 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 MAPK9P45984 424 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 PLOD1Q02809 727 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-204ENST00000396548 PYCR3Q53H96 274 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 KIAA0895LQ68EN5 471 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 ANO7Q6IWH7 933 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 AGR3Q8TD06 166 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 ZNF382Q96SR6 550 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 ZDHHC5Q9C0B5 715 aa12.42□□□□□ -0.42
TRIM39-204ENST00000396548 IGHV1OR15-9A0A0B4J2B8 117 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 KLHL33A6NCF5 533 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 KRT87PA6NCN2 255 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 C1orf105O95561 183 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 CCR3P51677 355 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 AP1S2P56377 157 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 CLDN2P57739 230 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 BTKQ06187 659 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 ABRQ12979 859 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 PLA2G4EQ3MJ16 856 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 CCSMST1Q4G0I0 132 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 CLNKQ7Z7G1 428 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 SPEM1Q8N4L4 309 aa12.41□□□□□ -0.42
TRIM39-204ENST00000396548 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms