RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 GOLGA8CPA6NN73 597 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 IQCF5A8MTL0 148 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 hCG_2039718K7EN88 272 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 SSX4O60224 188 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 SERPINA1P01009 418 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ITIH1P19827 911 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ZFP36L2P47974 494 aaKnown RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ERVK-8P63133 956 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 RPL38P63173 70 aaKnown RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 DAB2P98082 770 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PTPRNQ16849 979 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 FAM174BQ3ZCQ3 159 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 RFTN2Q52LD8 501 aaPredicted RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 MARCH8Q5T0T0 291 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PM20D1Q6GTS8 502 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 MRNIPQ6NTE8 343 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 CYP20A1Q6UW02 462 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 DLEU7Q6UYE1 221 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 GPRIN3Q6ZVF9 776 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 NECAB2Q7Z6G3 386 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 DCP2Q8IU60 420 aaKnown RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 SCN4BQ8IWT1 228 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 KCTD13Q8WZ19 329 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PROX1Q92786 737 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 LPPQ93052 612 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 HMCESQ96FZ2 354 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 TSGA13Q96PP4 275 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ATOH8Q96SQ7 321 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 CRISPLD2Q9H0B8 497 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 TRIM39Q9HCM9 518 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 C14orf119Q9NWQ9 140 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 IFT52Q9Y366 437 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ACTL7AQ9Y615 435 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 DNAJC25-GNG10A0A024R161 153 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 TYW5A2RUC4 315 aaKnown RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 NOTOA8MTQ0 251 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 TTC34A8MYJ7 566 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 CXCR6O00574 342 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 TULP3O75386 442 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 NDUFS3O75489 264 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 CYP11A1P05108 521 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 IGFBP5P24593 272 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 BMPR1AP36894 532 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PNPLA4P41247 253 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 MASP1P48740 699 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PPP5CP53041 499 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PHC1P78364 1004 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 HMGCS1Q01581 520 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 LAIR1Q6GTX8 287 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 CCBE1Q6UXH8 406 aaPredicted RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 USP43Q70EL4 1123 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 UBE2Q1Q7Z7E8 422 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 B3GNT8Q7Z7M8 397 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 LYSMD2Q8IV50 215 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 SIDT2Q8NBJ9 832 aaKnown RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 RHOXF1Q8NHV9 184 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PTCD2Q8WV60 388 aaKnown RBP9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PYCR2Q96C36 320 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 EXOC2Q96KP1 924 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF599Q96NL3 588 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ASB2Q96Q27 587 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 SEMA3CQ99985 751 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PAAF1Q9BRP4 392 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 HOXD1Q9GZZ0 328 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 MUC13Q9H3R2 512 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 BPIFA1Q9NP55 256 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ILVBLA1L0T0 632 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 SLC7A4O43246 635 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 GABARAPO95166 117 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 B3GALT4O96024 378 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 GGT1P19440 569 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 RAD51Q06609 339 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 TP53BP2Q13625 1128 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PTPRRQ15256 657 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 MAPKAPK3Q16644 382 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 KDELC1Q6UW63 502 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 Q6ZSR9 355 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 PLEKHH3Q7Z736 793 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ADHFE1Q8IWW8 467 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 KRTCAP2Q8N6L1 136 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 DYNC2LI1Q8TCX1 351 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 MYLPFQ96A32 169 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 RMDN1Q96DB5 314 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 C16orf70Q9BSU1 422 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 SLC25A51Q9H1U9 297 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 CATSPERZQ9NTU4 200 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 DERAQ9Y315 318 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 TPRKBQ9Y3C4 175 aa9.67□□□□□ -0.86
TRIM39-203ENST00000396547 ELOVL7A1L3X0 281 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 NUAK1O60285 661 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 NIPSNAP2O75323 286 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 PAPSS2O95340 614 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 UROSP10746 265 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 FDXRP22570 491 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 HOXD11P31277 338 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 CLCNKBP51801 687 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 AIF1P55008 147 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 ERVPABLB-1P60509 514 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 PPP2R2BQ00005 443 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 TIAL1Q01085 375 aaKnown RBP eCLIP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms