RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MMP2P08253 660 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 AMPD1P23109 780 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 MIPP30301 263 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 CTSCP53634 463 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 NFE2L1Q14494 772 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 SLC9A5Q14940 896 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 VWA3BQ502W6 1294 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 NCCRP1Q6ZVX7 275 aaPredicted RBP13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 POLNQ7Z5Q5 900 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 CREBRFQ8IUR6 639 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 OR11G2Q8NGC1 345 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 TEKT4Q8WW24 435 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 CHRNA10Q9GZZ6 450 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 SPRTNQ9H040 489 aaPredicted RBP13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 GANQ9H2C0 597 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 ZFYVE1Q9HBF4 777 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 FAM60AQ9NP50 221 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 CCM2LQ9NUG4 571 aaPredicted RBP13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 DHCR7Q9UBM7 475 aaKnown RBP13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 PCSK1NQ9UHG2 260 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 CPAMD8Q8IZJ3 1885 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 BTN3A3O00478 584 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 BIN1O00499 593 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 CRYABP02511 175 aaKnown RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 PVRP15151 417 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 HLA-DPA1P20036 260 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 MTIF2P46199 727 aaKnown RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 RBPJQ06330 500 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 TFF3Q07654 80 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 IRAK1BP1Q5VVH5 260 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 ARMC6Q6NXE6 501 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 TMCO3Q6UWJ1 677 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 RBM43Q6ZSC3 357 aaKnown RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 BIVMQ86UB2 503 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 NSMCE1Q8WV22 266 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 FATE1Q969F0 183 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 TRIB3Q96RU7 358 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 NRTNQ99748 197 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 MESP1Q9BRJ9 268 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 SLC26A1Q9H2B4 701 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 WDR54Q9H977 334 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 NPDC1Q9NQX5 325 aaPredicted RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 AMACRQ9UHK6 382 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 TLN2Q9Y4G6 2542 aa13.18□□□□□ -0.3
VCPKMT-201ENST00000395859 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ADAM10O14672 748 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ESRRAP11474 423 aaPredicted RBP13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 CASP6P55212 293 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ADAM8P78325 824 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ARG2P78540 354 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ITKQ08881 620 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ZIC1Q15915 447 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 NKG7Q16617 165 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 TUBB8Q3ZCM7 444 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ATP13A5Q4VNC0 1218 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 GPR135Q8IZ08 494 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 RASGEF1AQ8N9B8 481 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 OR4E2Q8NGC2 313 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 THAP3Q8WTV1 239 aaPredicted RBP13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 FKBP10Q96AY3 582 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 DMRTA2Q96SC8 542 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 SMR3AQ99954 134 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 NUP62CLQ9H1M0 184 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 ZWILCHQ9H900 591 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 GPAMQ9HCL2 828 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 RAD18Q9NS91 495 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 PLA2G3Q9NZ20 509 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
VCPKMT-201ENST00000395859 BTN3A1O00481 513 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 OR2B3O76000 313 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 ZRANB2O95218 330 aaKnown RBP eCLIP13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 PSMA2P25787 234 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 SOX5P35711 763 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 FOLH1Q04609 750 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 CACNG1Q06432 222 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 PRKAA1Q13131 559 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 XRCC4Q13426 336 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 DCUN1D2Q6PH85 259 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 COX15Q7KZN9 410 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 TAOK1Q7L7X3 1001 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 SPPL2CQ8IUH8 684 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 CHERPQ8IWX8 916 aaKnown RBP13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 DTX3LQ8TDB6 740 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 RMDN2Q96LZ7 410 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 C12orf66Q96MD2 445 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 XPO4Q9C0E2 1151 aaKnown RBP13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 KLHL25Q9H0H3 589 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms