RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 SEMA4CQ9C0C4 833 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 OR52A5Q9H2C5 316 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 FANCEQ9HB96 536 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 EIF2B3Q9NR50 452 aaKnown RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 FGF21Q9NSA1 209 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 PADI1Q9ULC6 663 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 HEMK1Q9Y5R4 338 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 ZNF106Q9H2Y7 1883 aaKnown RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 B8ZZF3 427 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 KDM1AO60341 852 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 GOT2P00505 430 aaKnown RBP13.37□□□□□ -0.27
CXCL12-205ENST00000395794 EBLN1P0CF75 366 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 ZSCAN5DPP0CG00 497 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 PRKAR1AP10644 381 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 ZNF28P17035 718 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 TCN2P20062 427 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 PDHA2P29803 388 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 FOXN2P32314 431 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 GRIA1P42261 906 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 ARCN1P48444 511 aaKnown RBP13.37□□□□□ -0.27
CXCL12-205ENST00000395794 TUBB4BP68371 445 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 PCID2Q5JVF3 399 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 AMIGO1Q86WK6 493 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 EXD3Q8N9H8 876 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 PHC3Q8NDX5 983 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 OR13J1Q8NGT2 312 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 OR8K5Q8NH50 307 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 STARD8Q92502 1023 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 TLR10Q9BXR5 811 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 TFB2MQ9H5Q4 396 aaKnown RBP13.37□□□□□ -0.27
CXCL12-205ENST00000395794 C1GALT1Q9NS00 363 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 BFARQ9NZS9 450 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 SLC2A6Q9UGQ3 507 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 POLG2Q9UHN1 485 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 KCND3Q9UK17 655 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 PPP2R2CQ9Y2T4 447 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 TCAF1Q9Y4C2 921 aa13.37□□□□□ -0.27
CXCL12-205ENST00000395794 ATMQ13315 3056 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 AHCTF1Q8WYP5 2266 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 C2orf74A8MZ97 194 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 NKX2-8O15522 239 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 KATNA1O75449 491 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 CXCR5P32302 372 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 NPY2RP49146 381 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 KPNA2P52292 529 aaKnown RBP13.36□□□□□ -0.27
CXCL12-205ENST00000395794 SESN2P58004 480 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-205ENST00000395794 SARNPP82979 210 aaKnown RBP13.36□□□□□ -0.27
CXCL12-205ENST00000395794 CCZ1BP86790 482 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 CCZ1P86791 482 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-205ENST00000395794 NFATC3Q12968 1075 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 PRKG2Q13237 762 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 BOP1Q14137 746 aaKnown RBP13.36□□□□□ -0.27
CXCL12-205ENST00000395794 BRD3Q15059 726 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 SIX1Q15475 284 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-205ENST00000395794 C16orf46Q6P387 395 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 TMEM126BQ8IUX1 230 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 D2HGDHQ8N465 521 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 GLIS1Q8NBF1 620 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 OR52E1Q8NGJ3 308 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 RNF31Q96EP0 1072 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 HGH1Q9BTY7 390 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 IL22Q9GZX6 179 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 ADNPQ9H2P0 1102 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 KCND1Q9NSA2 647 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 CATSPERZQ9NTU4 200 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 IL17BQ9UHF5 180 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 CROTQ9UKG9 612 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 POMT2Q9UKY4 750 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 ASF1AQ9Y294 204 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 SDK2Q58EX2 2172 aa13.36□□□□□ -0.27
CXCL12-205ENST00000395794 GOLGA6L3A6NEY3 463 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 SLC9B1P1A6NJY1 282 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 SCRG1O75711 98 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 PLA2G2AP14555 144 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 PRDX3P30048 256 aaKnown RBP13.35□□□□□ -0.27
CXCL12-205ENST00000395794 SHMT2P34897 504 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 TTPAP49638 278 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 POLE2P56282 527 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 CDK16Q00536 496 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 ACVR1Q04771 509 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 CDC20Q12834 499 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 ZNF658BQ4V348 819 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-205ENST00000395794 CRTC2Q53ET0 693 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-205ENST00000395794 PWWP2BQ6NUJ5 590 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 MICALCLQ6ZW33 695 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 OTUD6BQ8N6M0 293 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 GSDMBQ8TAX9 411 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 ZNF778Q96MU6 729 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 SYTL2Q9HCH5 934 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 CHRAC1Q9NRG0 131 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 GEMIN8Q9NWZ8 242 aaKnown RBP13.35□□□□□ -0.27
CXCL12-205ENST00000395794 TDRKHQ9Y2W6 561 aaKnown RBP13.35□□□□□ -0.27
CXCL12-205ENST00000395794 PRSS21Q9Y6M0 314 aa13.35□□□□□ -0.27
CXCL12-205ENST00000395794 C21orf140B9A014 251 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 BTN3A1O00481 513 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms