RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF451Q9Y4E5 1061 aa14.08□□□□□ -0.16
CLIP2-203ENST00000395060 MROH6A6NGR9 719 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 FAM20BO75063 409 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 COPZ1P61923 177 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 NFKB2Q00653 900 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 MAPKAPK3Q16644 382 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 UBE2UQ5VVX9 321 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 PSAPL1Q6NUJ1 521 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 B3GNT8Q7Z7M8 397 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 CDC26Q8NHZ8 85 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 ZHX1-C8orf76Q96EF9 292 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 CDKN2AIPNLQ96HQ2 116 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 NSMCE3Q96MG7 304 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 ROGDIQ9GZN7 287 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 DNAJB9Q9UBS3 223 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 B3GNT3Q9Y2A9 372 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 MED16Q9Y2X0 877 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 SSX4O60224 188 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 CD36P16671 472 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 IGFBP5P24593 272 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 CD40LGP29965 261 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 HSPA7P48741 367 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 STC1P52823 247 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 PPP2R2BQ00005 443 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 SCD5Q86SK9 330 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 LEMD2Q8NC56 503 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 OR4F6Q8NGB9 312 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 OR56A4Q8NGH8 313 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 SLX1AQ9BQ83 275 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 UGT2B28Q9BY64 529 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 IL37Q9NZH6 218 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 FLRT1Q9NZU1 646 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 C3orf18Q9UK00 162 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 BOLA1Q9Y3E2 137 aa14.07□□□□□ -0.16
CLIP2-203ENST00000395060 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
CLIP2-203ENST00000395060 FGF10O15520 208 aaPredicted RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 CELF2O95319 508 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 WISP3O95389 354 aaPredicted RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 OR1E1P30953 314 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 GRK4P32298 578 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 CLCA4Q14CN2 919 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 IRAK1BP1Q5VVH5 260 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 CEP68Q76N32 757 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 NECAB2Q7Z6G3 386 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 AKAP14Q86UN6 197 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 CYP4Z1Q86W10 505 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 DCP2Q8IU60 420 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 RBM4BQ9BQ04 359 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 RBM4Q9BWF3 364 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 TFB2MQ9H5Q4 396 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 SMPD4Q9NXE4 827 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 HACD3Q9P035 362 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 PCDHGA10Q9Y5H3 936 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 A0A0D9SEW6 157 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 A0A1W2PQ67 120 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 ELOVL7A1L3X0 281 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 RPP40O75818 363 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 HSMCR30P0CW71 290 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 TRPC1P48995 793 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 PON2Q15165 354 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 SMYD5Q6GMV2 418 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 CES5AQ6NT32 575 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 PAF1Q8N7H5 531 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 ARRDC2Q8TBH0 407 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 GIPC2Q8TF65 315 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 LGALS12Q96DT0 336 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 DMRTB1Q96MA1 342 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 REXO4Q9GZR2 422 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 TP63Q9H3D4 680 aaPredicted RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 TRMT6Q9UJA5 497 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 CDH9Q9ULB4 789 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 PCDHGC4Q9Y5F7 938 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 GLTPD2A6NH11 291 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 TULP3O75386 442 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 MFN2O95140 757 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 ABCB1P08183 1280 aaPredicted RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 PCSK1P29120 753 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 NUDT6P53370 316 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 DEPDC1Q5TB30 811 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 BEND5Q7L4P6 421 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 LIMS2Q7Z4I7 341 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 TLK2Q86UE8 772 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 OR6Q1Q8NGQ2 317 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 SLC13A3Q8WWT9 602 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 ITPKCQ96DU7 683 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 DSN1Q9H410 356 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 DDX28Q9NUL7 540 aaKnown RBP14.06□□□□□ -0.16
CLIP2-203ENST00000395060 GMPPBQ9Y5P6 360 aa14.06□□□□□ -0.16
CLIP2-203ENST00000395060 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
CLIP2-203ENST00000395060 M0R129 80 aa14.05□□□□□ -0.16
CLIP2-203ENST00000395060 TNPO2O14787 897 aaKnown RBP14.05□□□□□ -0.16
CLIP2-203ENST00000395060 SH3BGRLO75368 114 aa14.05□□□□□ -0.16
CLIP2-203ENST00000395060 CYP7B1O75881 506 aa14.05□□□□□ -0.16
CLIP2-203ENST00000395060 RPS17P08708 135 aaKnown RBP14.05□□□□□ -0.16
CLIP2-203ENST00000395060 CD6P30203 668 aa14.05□□□□□ -0.16
CLIP2-203ENST00000395060 DGKEP52429 567 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms