RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CDHR3Q6ZTQ4 885 aa15.33■□□□□ 0.04
SNCA-205ENST00000394991 MCEMP1Q8IX19 187 aa15.33■□□□□ 0.04
SNCA-205ENST00000394991 TRABDQ9H4I3 376 aa15.33■□□□□ 0.04
SNCA-205ENST00000394991 AGPAT4Q9NRZ5 378 aa15.33■□□□□ 0.04
SNCA-205ENST00000394991 SERTAD3Q9UJW9 196 aa15.33■□□□□ 0.04
SNCA-205ENST00000394991 NOVA2Q9UNW9 492 aaKnown RBP15.33■□□□□ 0.04
SNCA-205ENST00000394991 LRRD1A4D1F6 860 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 C3orf70A6NLC5 250 aaPredicted RBP15.32■□□□□ 0.04
SNCA-205ENST00000394991 MATN2O00339 956 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 PEX12O00623 359 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 HCRTR1O43613 425 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 IPO13O94829 963 aaKnown RBP15.32■□□□□ 0.04
SNCA-205ENST00000394991 POLBP06746 335 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 MSH3P20585 1137 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 PTPN3P26045 913 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 FOLR3P41439 243 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 PER3P56645 1201 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 WNT3AP56704 352 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 ITGA9Q13797 1035 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 PDK1Q15118 436 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 HIF1AQ16665 826 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 BCL7AQ4VC05 210 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 TEX44Q53QW1 395 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 ZFYVE27Q5T4F4 411 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 C1orf189Q5VU69 101 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 SLC25A41Q8N5S1 370 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 ACVR1CQ8NER5 493 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 GRHL3Q8TE85 626 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 LCN9Q8WX39 176 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 TM9SF4Q92544 642 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 NAP1L5Q96NT1 182 aaPredicted RBP15.32■□□□□ 0.04
SNCA-205ENST00000394991 GBP5Q96PP8 586 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 WDR77Q9BQA1 342 aaPredicted RBP15.32■□□□□ 0.04
SNCA-205ENST00000394991 SRMSQ9H3Y6 488 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 FAM60AQ9NP50 221 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 NENFQ9UMX5 172 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 CDYLQ9Y232 598 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 COLEC10Q9Y6Z7 277 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 PCNX1Q96RV3 2341 aa15.32■□□□□ 0.04
SNCA-205ENST00000394991 A0A1B0GTH6 734 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 PRSS44E7EML9 344 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
SNCA-205ENST00000394991 KLHL41O60662 606 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 UMODP07911 640 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 HBQ1P09105 142 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 GSE1Q14687 1217 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 ALKBH5Q6P6C2 394 aaKnown RBP15.31■□□□□ 0.04
SNCA-205ENST00000394991 GLT6D1Q7Z4J2 308 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 OR2Y1Q8NGV0 311 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 BLOC1S5Q8TDH9 187 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 MRGPRX2Q96LB1 330 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 LINC00615Q96LM1 132 aaPredicted RBP15.31■□□□□ 0.04
SNCA-205ENST00000394991 TEKT5Q96M29 485 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 DEF6Q9H4E7 631 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNCA-205ENST00000394991 CTTNBP2NLQ9P2B4 639 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 FAM153AQ9UHL3 310 aa15.31■□□□□ 0.04
SNCA-205ENST00000394991 ITPR3Q14573 2671 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 ZNF487B1APH4 448 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 APOL1O14791 398 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 ALOX12BO75342 701 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 PRAMEF1O95521 474 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 IGHEP01854 428 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 CTSBP07858 339 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 EDN3P14138 238 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 NFKB1P19838 968 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 GABRA4P48169 554 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 KRT33BQ14525 404 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 SLC9A5Q14940 896 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 PRKD1Q15139 912 aaPredicted RBP15.3■□□□□ 0.04
SNCA-205ENST00000394991 NFKBIBQ15653 356 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 DEFB110Q30KQ9 67 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 FILIP1LQ4L180 1135 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 FIGNQ5HY92 759 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 RHBDD2Q6NTF9 364 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 MRPL14Q6P1L8 145 aaKnown RBP15.3■□□□□ 0.04
SNCA-205ENST00000394991 TRIM73Q86UV7 250 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 CFAP206Q8IYR0 622 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 OR52E1Q8NGJ3 308 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 ZNF398Q8TD17 642 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.3■□□□□ 0.04
SNCA-205ENST00000394991 PPP4R1Q8TF05 950 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 C17orf62Q9BQA9 187 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 SPRTNQ9H040 489 aaPredicted RBP15.3■□□□□ 0.04
SNCA-205ENST00000394991 HACD3Q9P035 362 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 DHCR7Q9UBM7 475 aaKnown RBP15.3■□□□□ 0.04
SNCA-205ENST00000394991 GPN3Q9UHW5 284 aaPredicted RBP15.3■□□□□ 0.04
SNCA-205ENST00000394991 HEBP2Q9Y5Z4 205 aa15.3■□□□□ 0.04
SNCA-205ENST00000394991 BZW2Q9Y6E2 419 aaKnown RBP15.3■□□□□ 0.04
SNCA-205ENST00000394991 SYCE3A1L190 88 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 KLHL33A6NCF5 533 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 SERPING1P05155 500 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 PTMSP20962 102 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 ITGA3P26006 1051 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 TSFMP43897 325 aaKnown RBP15.29■□□□□ 0.04
SNCA-205ENST00000394991 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 ZIC1Q15915 447 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 IGFL2Q6UWQ7 119 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 FJX1Q86VR8 437 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms