RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PRKCHP24723 683 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 NRG3P56975 720 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 RAB25P57735 213 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 PLGLB1Q02325 96 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 CELF5Q8N6W0 485 aaKnown RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 HIST1H2AAQ96QV6 131 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 DMTF1Q9Y222 760 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 PCDHB11Q9Y5F2 797 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 PCDHGA11Q9Y5H2 935 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 C9J4A7 227 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 LOC110117498-PIK3R3F6TDL0 507 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 PIP5K1BO14986 540 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 IRAK2O43187 625 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 PLGP00747 810 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 ZNF823P16415 610 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 IL7RP16871 459 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 ATP5A1P25705 553 aaKnown RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 CCR8P51685 355 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 NCBP2P52298 156 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 GFOD2Q3B7J2 385 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 VWA5B1Q5TIE3 1220 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 OR2AJ1Q8NGZ0 328 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 CYP2S1Q96SQ9 504 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 REXO2Q9Y3B8 237 aaKnown RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 ZNF536O15090 1300 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 C9JVG2 144 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 GNAZP19086 355 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 RPS24P62847 133 aaKnown RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 OC90Q02509 493 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 SIM2Q14190 667 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 EOGTQ5NDL2 527 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 PQLC1Q8N2U9 271 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 FAM110BQ8TC76 370 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 SIPA1Q96FS4 1042 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 FZD8Q9H461 694 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 GKN1Q9NS71 199 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 RGS17Q9UGC6 210 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-203ENST00000394872 RAPGEFL1Q9UHV5 662 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 ZNF180Q9UJW8 692 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 PHF24Q9UPV7 400 aa10.23□□□□□ -0.77
COL4A6-203ENST00000394872 A8MUA0 341 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 PRPS2P11908 318 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 HSD17B2P37059 387 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 PPP3R1P63098 170 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 IL18R1Q13478 541 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SGCBQ16585 318 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 EIPR1Q53HC9 387 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 GALNTL5Q7Z4T8 443 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SAMD14Q8IZD0 417 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 OR4C6Q8NH72 309 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SLC22A18Q96BI1 424 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 C8orf4Q9NR00 106 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 TPD52L2O43399 206 aaKnown RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 CCNB2O95067 398 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 CYB5AP00167 134 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 PTP4A2Q12974 167 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SLC1A5Q15758 541 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 LPCAT4Q643R3 524 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 TMEM192Q8IY95 271 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 FAM47BQ8NA70 645 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 FAR1Q8WVX9 515 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 C11orf16Q9NQ32 467 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 HMGXB4Q9UGU5 601 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SNX7Q9UNH6 387 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 C3P01024 1663 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 PSMD9O00233 223 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 AP2A2O94973 939 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 ALOX5P09917 674 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 RAB2AP61019 212 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 POU5F1Q01860 360 aaKnown RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SOWAHAQ2M3V2 549 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SMARCD3Q6STE5 483 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 DLK2Q6UY11 383 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 P4HA3Q7Z4N8 544 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 GTPBP3Q969Y2 492 aaKnown RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 ZBED6CLQ96FA7 236 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 RIOK2Q9BVS4 552 aaKnown RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 IFT80Q9P2H3 777 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SRRDQ9UH36 339 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 FADS3Q9Y5Q0 445 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 A0A1W2PQ72 361 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 GNB5O14775 395 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 NME6O75414 186 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 CDH12P55289 794 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 LCN1P1Q5VSP4 162 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 CLEC20AQ6ZU45 233 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 NANOGNBQ7Z5D8 188 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 MEIOBQ8N635 442 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 ZNF514Q96K75 400 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-203ENST00000394872 ALG2Q9H553 416 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 S100A14Q9HCY8 104 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 CDH22Q9UJ99 828 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 A8MU76 341 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 INPPL1O15357 1258 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 SLC7A4O43246 635 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 ZNF208O43345 1280 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 RGS10O43665 173 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 ALPPP05187 535 aa10.22□□□□□ -0.77
COL4A6-203ENST00000394872 DBIP07108 87 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms