RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MPP3Q13368 585 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 KYNUQ16719 465 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 ZNF658BQ4V348 819 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-202ENST00000393773 IGFL3Q6UXB1 125 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 SPOCD1Q6ZMY3 1216 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 CDHR3Q6ZTQ4 885 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 CISD2Q8N5K1 135 aaKnown RBP14.9□□□□□ -0.02
CHMP3-202ENST00000393773 SLC35G2Q8TBE7 412 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 HM13Q8TCT9 377 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 ZNF398Q8TD17 642 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 C5orf34Q96MH7 638 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 TRAPPC9Q96Q05 1148 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 DHRS4Q9BTZ2 278 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 KLHL25Q9H0H3 589 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 KLHL8Q9P2G9 620 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-202ENST00000393773 FKBPLQ9UIM3 349 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 NTNG1Q9Y2I2 539 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 HEBP2Q9Y5Z4 205 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 COLEC10Q9Y6Z7 277 aa14.9□□□□□ -0.02
CHMP3-202ENST00000393773 PDZD2O15018 2839 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 SVILO95425 2214 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 CSMD2Q7Z408 3487 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 ANKUB1A6NFN9 424 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 AGAP14A8MT82 685 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 STX7O15400 261 aaKnown RBP14.89□□□□□ -0.03
CHMP3-202ENST00000393773 ZNF749O43361 778 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 SRP72O76094 671 aaKnown RBP14.89□□□□□ -0.03
CHMP3-202ENST00000393773 POLBP06746 335 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 ARHGAP25P42331 645 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 TNNT3P45378 269 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-202ENST00000393773 UBASH3AP57075 661 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 MYBPC3Q14896 1274 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 DCAF10Q5QP82 559 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 C1QL3Q5VWW1 255 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 LUZP1Q86V48 1076 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 OR4K2Q8NGD2 314 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 LCN9Q8WX39 176 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 QKIQ96PU8 341 aaKnown RBP eCLIP14.89□□□□□ -0.032e-7■■■■□ 25.7
CHMP3-202ENST00000393773 FSD1LQ9BXM9 530 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 OR52A5Q9H2C5 316 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 SRMSQ9H3Y6 488 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 DDX56Q9NY93 547 aaKnown RBP14.89□□□□□ -0.03
CHMP3-202ENST00000393773 PCDHGA10Q9Y5H3 936 aa14.89□□□□□ -0.03
CHMP3-202ENST00000393773 HCRTR1O43613 425 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 CST8O60676 142 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 CNOT3O75175 753 aaKnown RBP14.88□□□□□ -0.03
CHMP3-202ENST00000393773 CBSLP0DN79 551 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 TNFRSF8P28908 595 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 CBSP35520 551 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 HADHAP40939 763 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 XIAPP98170 497 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 GSE1Q14687 1217 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 BZW1Q7L1Q6 419 aaKnown RBP14.88□□□□□ -0.03
CHMP3-202ENST00000393773 ZC3H18Q86VM9 953 aaKnown RBP14.88□□□□□ -0.03
CHMP3-202ENST00000393773 CFAP206Q8IYR0 622 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 ADGRF3Q8IZF5 1079 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 GALNT16Q8N428 558 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 OR52E1Q8NGJ3 308 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 UBE2Q2Q8WVN8 375 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 IP6K3Q96PC2 410 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 VAT1Q99536 393 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 CCM2Q9BSQ5 444 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 ILKAPQ9H0C8 392 aaPredicted RBP14.88□□□□□ -0.03
CHMP3-202ENST00000393773 TFB2MQ9H5Q4 396 aaKnown RBP14.88□□□□□ -0.03
CHMP3-202ENST00000393773 ZNF552Q9H707 407 aaPredicted RBP14.88□□□□□ -0.03
CHMP3-202ENST00000393773 ASB8Q9H765 288 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 COG4Q9H9E3 785 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 DCHS2Q6V1P9 2916 aa14.88□□□□□ -0.03
CHMP3-202ENST00000393773 MASP2O00187 686 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 ALPPP05187 535 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 HBQ1P09105 142 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 AGXTP21549 392 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 GABRA4P48169 554 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 FOXL2P58012 376 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 TFDP2Q14188 446 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 KRT33BQ14525 404 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 TAF1AQ15573 450 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-202ENST00000393773 DEFB110Q30KQ9 67 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 LYPLAL1Q5VWZ2 237 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 RHBDD2Q6NTF9 364 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 CAVIN1Q6NZI2 390 aaKnown RBP14.87□□□□□ -0.03
CHMP3-202ENST00000393773 SPESP1Q6UW49 350 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 Q6ZS92 163 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 PPP1R32Q7Z5V6 425 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 CUZD1Q86UP6 607 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 TMEM151BQ8IW70 566 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 RHOT2Q8IXI1 618 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 NXPE1Q8N323 547 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 C19orf47Q8N9M1 422 aaKnown RBP14.87□□□□□ -0.03
CHMP3-202ENST00000393773 CLEC1AQ8NC01 280 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 FER1L6-AS2Q96M78 137 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 GBP5Q96PP8 586 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 DNAJC7Q99615 494 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 HGH1Q9BTY7 390 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 FICDQ9BVA6 458 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 SLC7A5P2Q9GIP4 190 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 GBA3Q9H227 469 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 ZBTB20Q9HC78 741 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-202ENST00000393773 FAM60AQ9NP50 221 aa14.87□□□□□ -0.03
CHMP3-202ENST00000393773 ACTR10Q9NZ32 417 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms