RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CAPN3P20807 821 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SPAM1P38567 509 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 COPZ1P61923 177 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ACOX1Q15067 660 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 AKAP14Q86UN6 197 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SCML4Q8N228 414 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 GPR156Q8NFN8 814 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 MDGA1Q8NFP4 955 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 C2orf15Q8WU43 125 aaKnown RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 MYEOVQ96EZ4 313 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 UGT2B28Q9BY64 529 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 TNFRSF12AQ9NP84 129 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ASAH2Q9NR71 780 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 KIAA1522Q9P206 1035 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 IGLV3-25P01717 112 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ANXA6P08133 673 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 AP1S1P61966 158 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 DSC1Q08554 894 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ACSM2AQ08AH3 577 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 GK3PQ14409 553 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ARHGAP15Q53QZ3 475 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 MANEALQ5VSG8 457 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ACSM2BQ68CK6 577 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 CYP20A1Q6UW02 462 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 TMEM207Q6UWW9 146 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SLC15A3Q8IY34 581 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ATG16L2Q8NAA4 619 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 VPS37AQ8NEZ2 397 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 OR10Q1Q8NGQ4 319 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 C12orf43Q96C57 262 aaKnown RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 ADI1Q9BV57 179 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SOX17Q9H6I2 414 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 TBC1D30Q9Y2I9 924 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 LOC285095A0A1B0GVY8 99 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 TMEM221A6NGB7 291 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SERPINI2O75830 405 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 CXCL14O95715 111 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SLC5A2P31639 672 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 YAP1P46937 504 aaKnown RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 GSTM4Q03013 218 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 TRAP1Q12931 704 aaKnown RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 CYP2A13Q16696 494 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 OGFRL1Q5TC84 451 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 RSPO2Q6UXX9 243 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 MICU2Q8IYU8 434 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 LIX1Q8N485 282 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 CENPNQ96H22 339 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 LRCH3Q96II8 777 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 RAD21L1Q9H4I0 556 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 AASDHPPTQ9NRN7 309 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 RLFQ13129 1914 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 A0A1W2PP18 115 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 WASH4PA8MWX3 477 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 UBFD1O14562 309 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 TSC22D2O75157 780 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 ACRP10323 421 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 ATF6P18850 670 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 IFNA8P32881 189 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 MAPK8P45983 427 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 SEPHS1P49903 392 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 PTGR1Q14914 329 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 TRIM60Q495X7 471 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 ABRAXAS1Q6UWZ7 409 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 CHSY3Q70JA7 882 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 TRMT11Q7Z4G4 463 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 TBC1D21Q8IYX1 336 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 AHI1Q8N157 1196 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 POC5Q8NA72 575 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 FUBP1Q96AE4 644 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 UBXN10Q96LJ8 280 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 FEM1AQ9BSK4 669 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 HERC2P3Q9BVR0 1158 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 BOCQ9BWV1 1114 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 TRPV5Q9NQA5 729 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 INTS7Q9NVH2 962 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 SPEF1Q9Y4P9 236 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 ST14Q9Y5Y6 855 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 SNPHO15079 494 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 FKTNO75072 461 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 COX7A2P14406 83 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 HOXC13P31276 330 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 GRIA2P42262 883 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 STK19P49842 368 aaPredicted RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 PRKCQQ04759 706 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 SMU1Q2TAY7 513 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 C6orf136Q5SQH8 315 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.35□□□□□ -0.75
CALD1-203ENST00000393118 MBOAT1Q6ZNC8 495 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 TMEM26Q6ZUK4 368 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 TRAPPC5Q8IUR0 188 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 EID3Q8N140 333 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 TMEM132CQ8N3T6 1108 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 TTC30BQ8N4P2 665 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 ZNF366Q8N895 744 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 RIBC2Q9H4K1 309 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 SQORQ9Y6N5 450 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 NME4O00746 187 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 SEMA3DO95025 777 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms