RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RNASE8Q8TDE3 154 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 SCARF2Q96GP6 870 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 STAP1Q9ULZ2 295 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 COL17A1Q9UMD9 1497 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 HTTP42858 3142 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 A8MZ25 164 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 E9PI62 339 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 STAG3L2P0CL84 134 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CDC25CP30307 473 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 TMPOP42166 694 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 CORO7P57737 925 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ACY1Q03154 408 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 NCBP1Q09161 790 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 CCDC6Q16204 474 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 AKNAD1Q5T1N1 836 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 WLSQ5T9L3 541 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DENND2CQ68D51 928 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 GRHL2Q6ISB3 625 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 KCNV1Q6PIU1 500 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SYT10Q6XYQ8 523 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 RBPMS2Q6ZRY4 209 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 C15orf52Q6ZUT6 534 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 ZNF808Q8N4W9 903 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 MIGA1Q8NAN2 632 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 OR4D6Q8NGJ1 314 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SOCS4Q8WXH5 440 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 MYLIPQ8WY64 445 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 PIGBQ92521 554 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SPATA33Q96N06 139 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 MS4A10Q96PG2 267 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 UBL7Q96S82 380 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 MDFIQ99750 246 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 UQCC2Q9BRT2 126 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 MTG1Q9BT17 334 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 ZNF768Q9H5H4 540 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 WDR26Q9H7D7 661 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 GCM1Q9NP62 436 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CYTH4Q9UIA0 394 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 FLVCR2Q9UPI3 526 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 IFT52Q9Y366 437 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ABCA10Q8WWZ4 1543 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DDTLA6NHG4 134 aaPredicted RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 PRSS29PA6NIE9 313 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 HSBP1L1C9JCN9 74 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 F8VZ95 297 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 XPO1O14980 1071 aaKnown RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 TFP02787 698 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 NDUFB7P17568 137 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 P2RX3P56373 397 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 CSNK2A1P68400 391 aaPredicted RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 E2F1Q01094 437 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 P2RY14Q15391 338 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ZSCAN25Q6NSZ9 544 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 TMEM88Q6PEY1 159 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 SLC39A5Q6ZMH5 540 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 CYB5R4Q7L1T6 521 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ATG9AQ7Z3C6 839 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 BNIPLQ7Z465 357 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ABRAQ8N0Z2 381 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 STKLD1Q8NE28 680 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 CSNK2A3Q8NEV1 391 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 GRHL3Q8TE85 626 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ZNF384Q8TF68 577 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ART5Q96L15 291 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 MTMR9Q96QG7 549 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 SECISBP2Q96T21 854 aaKnown RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 NPAS2Q99743 824 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ALG12Q9BV10 488 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 NUP58Q9BVL2 599 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 PANK2Q9BZ23 570 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 UPF3BQ9BZI7 483 aaKnown RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 DPEP2Q9H4A9 486 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 MRPL44Q9H9J2 332 aaKnown RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 SAP30LQ9HAJ7 183 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 KCNK13Q9HB14 408 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 GPR35Q9HC97 309 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 IL23AQ9NPF7 189 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 MRPS33Q9Y291 106 aaKnown RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 LOC102723996A0A087X1L8 192 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 CXorf65A6NEN9 183 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 CLDN4O14493 209 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 VCYO14598 125 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 N4BP1O75113 896 aaKnown RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 ALOX5P09917 674 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 SPP1P10451 314 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ANXA13P27216 316 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 HOXD10P28358 340 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 CHRNA5P30532 468 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ALDH1B1P30837 517 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 HOXC8P31273 242 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 SUCLG1P53597 346 aaKnown RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 GEMP55040 296 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 NEDD9Q14511 834 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 PFKFB3Q16875 520 aaPredicted RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 ZXDCQ2QGD7 858 aaPredicted RBP3.48□□□□□ -1.85
XRN1-202ENST00000392981 C10orf120Q5SQS8 335 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 DCAF12L2Q5VW00 463 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 ZDHHC20Q5W0Z9 365 aa3.48□□□□□ -1.85
XRN1-202ENST00000392981 KIAA1161Q6NSJ0 714 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms