RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PEX10O60683 326 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 ERN1O75460 977 aaKnown RBP12.92□□□□□ -0.34
LCA5-202ENST00000392959 ANXA8P13928 327 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 ADAM17P78536 824 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 TRPV3Q8NET8 790 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 DNASE1L2Q92874 299 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 C1QTNF1Q9BXJ1 281 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 DSN1Q9H410 356 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 NFS1Q9Y697 457 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 A0A1W2PRG6 482 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 ARL5CA6NH57 179 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 RIIAD1A6NNX1 92 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 ARPC2O15144 300 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 DLX3O60479 287 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 POP4O95707 220 aaKnown RBP12.92□□□□□ -0.34
LCA5-202ENST00000392959 CDH1P12830 882 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 RABGGTBP53611 331 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 PLA2G4EQ3MJ16 856 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 MSS51Q4VC12 460 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 PJA1Q8NG27 643 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
LCA5-202ENST00000392959 NECTIN3Q9NQS3 549 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
LCA5-202ENST00000392959 OR51F1A6NGY5 319 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 SLC22A1O15245 554 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 NOS1APO75052 506 aaPredicted RBP12.92□□□□□ -0.34
LCA5-202ENST00000392959 CD36P16671 472 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 FLT3LGP49771 235 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 CDH15P55291 814 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 HSF2Q03933 536 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 ATP13A5Q4VNC0 1218 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 SMG8Q8ND04 991 aaKnown RBP12.92□□□□□ -0.34
LCA5-202ENST00000392959 OR8H1Q8NGG4 311 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 OR13C4Q8NGS5 318 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 PIGXQ8TBF5 258 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 SNX33Q8WV41 574 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 CEP295NLQ96MC4 621 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 GFM1Q96RP9 751 aaKnown RBP12.92□□□□□ -0.34
LCA5-202ENST00000392959 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 DUSP26Q9BV47 211 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 IFNA6P05013 189 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 C8BP07358 591 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 CHRM5P08912 532 aaPredicted RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 IDSP22304 550 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 MYBPC3Q14896 1274 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 NOL9Q5SY16 702 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 KLHDC10Q6PID8 442 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 CCDC36Q8IYA8 594 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 PEX5LQ8IYB4 626 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ZNF347Q96SE7 839 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 SLC39A3Q9BRY0 314 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 KCNN2Q9H2S1 579 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 PRKAB1Q9Y478 270 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 SYN3O14994 580 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ATP6V1G1O75348 118 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 MYCLP1P12525 358 aaPredicted RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 ALDH3A2P51648 485 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ARF5P84085 180 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 HSPB3Q12988 150 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 PDE12Q6L8Q7 609 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 ZC3HC1Q86WB0 502 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 ZNF563Q8TA94 476 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 CGREF1Q99674 301 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 LPIN3Q9BQK8 851 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 POLR2J2Q9GZM3 115 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 ANKRA2Q9H9E1 313 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ZNF282Q9UDV7 671 aaPredicted RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 CD84Q9UIB8 345 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3DA0A087WVF3 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3IA0A087WXS9 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3KA0A087X1G2 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3FA6NER0 549 aaPredicted RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 FABP12A6NFH5 140 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3LB9A6J9 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 LSM1O15116 133 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 FFAR2O15552 330 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ORC5O43913 435 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3HP0C7X1 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 RHDQ02161 417 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3GQ6DHY5 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3CQ6IPX1 549 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 FUT10Q6P4F1 479 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 CLEC20AQ6ZU45 233 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D3Q8IZP1 549 aaPredicted RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 ZMIZ2Q8NF64 920 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 OR10H5Q8NGA6 315 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 MOV10Q9HCE1 1003 aaKnown RBP12.91□□□□□ -0.34
LCA5-202ENST00000392959 IL1RAPQ9NPH3 570 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 PIGVQ9NUD9 493 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 STOML2Q9UJZ1 356 aa12.91□□□□□ -0.34
LCA5-202ENST00000392959 ZNF214Q9UL59 606 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms