RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 WDR37Q9Y2I8 494 aa6.61□□□□□ -1.35
UBBP1-201ENST00000392399 VWA7Q9Y334 891 aa6.61□□□□□ -1.35
UBBP1-201ENST00000392399 DHRS7Q9Y394 339 aa6.61□□□□□ -1.35
UBBP1-201ENST00000392399 CEP295Q9C0D2 2601 aa6.61□□□□□ -1.35
UBBP1-201ENST00000392399 PIKFYVEQ9Y2I7 2098 aa6.61□□□□□ -1.35
UBBP1-201ENST00000392399 IGHV1OR21-1A0A087WYE8 117 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 FAM159BA6NKW6 160 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 OR52A4PA6NMU1 304 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 IQCF5A8MTL0 148 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 B4GAT1O43505 415 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 NIPSNAP2O75323 286 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 VPS26AO75436 327 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CPNE6O95741 557 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 MYF5P13349 255 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ENO3P13929 434 aaPredicted RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 JUPP14923 745 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 MCM3P25205 808 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 GABRB3P28472 473 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 TNFRSF8P28908 595 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CD1CP29017 333 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 PDHA2P29803 388 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ALDH4A1P30038 563 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ECHS1P30084 290 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CCNFP41002 786 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 RGS4P49798 205 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CCL7P80098 99 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 INSM1Q01101 510 aaPredicted RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 BOP1Q14137 746 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 SPIDRQ14159 915 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 GBX1Q14549 363 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 KYNUQ16719 465 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 TEX35Q5T0J7 233 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 GRTP1Q5TC63 336 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CDCP2Q5VXM1 449 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 FAM45BPQ6NSW5 357 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ZNF549Q6P9A3 640 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 DHRS13Q6UX07 377 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 UNC5DQ6UXZ4 953 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 RBM44Q6ZP01 1051 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 MICALCLQ6ZW33 695 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 NEK10Q6ZWH5 1172 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 TRMT10CQ7L0Y3 403 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 STRA8Q7Z7C7 330 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 PIM3Q86V86 326 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 SFTPA2Q8IWL1 248 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 KRT222Q8N1A0 295 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ZBTB2Q8N680 514 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 LILRA3Q8N6C8 439 aaPredicted RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 PHC3Q8NDX5 983 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ACVR1CQ8NER5 493 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 OR10G6Q8NH81 332 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 FAM45AQ8TCE6 357 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 MAGEC3Q8TD91 643 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 FBF1Q8TES7 1133 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 NAT14Q8WUY8 206 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 INPP5DQ92835 1189 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 AHCYL2Q96HN2 611 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 VPS39Q96JC1 886 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 FOPNLQ96NB1 174 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 TMEM74Q96NL1 305 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 FERD3LQ96RJ6 166 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 GFM1Q96RP9 751 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CYTH2Q99418 400 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CPNE1Q99829 537 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 RAB33BQ9H082 229 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 RHOJQ9H4E5 214 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 TFB2MQ9H5Q4 396 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 KIR3DX1Q9H7L2 352 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 IMP3Q9NV31 184 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 KCNK4Q9NYG8 393 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CLCA2Q9UQC9 943 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 CDYLQ9Y232 598 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ASF1AQ9Y294 204 aa6.6□□□□□ -1.35
UBBP1-201ENST00000392399 ZFC3H1O60293 1989 aaKnown RBP6.6□□□□□ -1.35
UBBP1-201ENST00000392399 RP1P56715 2156 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 NCOR2Q9Y618 2525 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 A0A1W2PQM1 296 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MATN2O00339 956 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 TOX3O15405 576 aaPredicted RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 DUX1O43812 170 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 UBXN7O94888 489 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MATN4O95460 622 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MT-CO3P00414 261 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 C1QAP02745 245 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 RPLP0P05388 317 aaKnown RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MPC1LP0DKB6 136 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 AMD1P17707 334 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 ITGB6P18564 788 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 SPRP35270 261 aaPredicted RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 GP5P40197 560 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 PREPP48147 710 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 CLCN7P51798 805 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 OR1D5P58170 312 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 SHC2P98077 582 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MPP1Q00013 466 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 POU4F1Q01851 419 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 TRA2AQ13595 282 aaKnown RBP eCLIP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 GPR18Q14330 331 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms