RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 FBXO10Q9UK96 956 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 NEUROG3Q9Y4Z2 214 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 PCDHB9Q9Y5E1 797 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 TMEM247A6NEH6 219 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 EPOP01588 193 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 MAP2K4P45985 399 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 PWP1Q13610 501 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 TXNDC11Q6PKC3 985 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 LIX1Q8N485 282 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 CIPCQ9C0C6 399 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 SMPD4Q9NXE4 827 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 SLC25A37Q9NYZ2 338 aa20.62■□□□□ 0.89
COL23A1-201ENST00000390654 TDRD15B5MCY1 1934 aaKnown RBP20.61■□□□□ 0.89
COL23A1-201ENST00000390654 UPK3BL1B0FP48 263 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 UPK3BL2E5RIL1 263 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 SEC22BO75396 215 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 GJB5O95377 273 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 TYMPP19971 482 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 KPNA1P52294 538 aaPredicted RBP20.61■□□□□ 0.89
COL23A1-201ENST00000390654 TMBIM6P55061 237 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 CYP4F3Q08477 520 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 C17orf99Q6UX52 265 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 RSPO2Q6UXX9 243 aaPredicted RBP20.61■□□□□ 0.89
COL23A1-201ENST00000390654 ZNF382Q96SR6 550 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 FNIP2Q9P278 1114 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 AFF4Q9UHB7 1163 aaKnown RBP20.61■□□□□ 0.89
COL23A1-201ENST00000390654 DAPK2Q9UIK4 370 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 VPS4AQ9UN37 437 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 NLRC5Q86WI3 1866 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 PRSS23O95084 383 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 LRATO95237 230 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 GSSP48637 474 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 YBEYP58557 167 aaPredicted RBP20.61■□□□□ 0.89
COL23A1-201ENST00000390654 GTF2H3Q13889 308 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 LAIR2Q6ISS4 152 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 COLGALT2Q8IYK4 626 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 LKAAEAR1Q8TD35 194 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 RAB2BQ8WUD1 216 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 MGME1Q9BQP7 344 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 SNX5Q9Y5X3 404 aa20.61■□□□□ 0.89
COL23A1-201ENST00000390654 ADAM23O75077 832 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 FOXD4Q12950 439 aaPredicted RBP20.6■□□□□ 0.89
COL23A1-201ENST00000390654 MAPK11Q15759 364 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 NFE2Q16621 373 aaPredicted RBP20.6■□□□□ 0.89
COL23A1-201ENST00000390654 TRIM16LQ309B1 348 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 ATXN7L2Q5T6C5 722 aaPredicted RBP20.6■□□□□ 0.89
COL23A1-201ENST00000390654 GTF2IRD2BQ6EKJ0 949 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 PTRHD1Q6GMV3 140 aaKnown RBP20.6■□□□□ 0.89
COL23A1-201ENST00000390654 GTF2IRD2Q86UP8 949 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 DPY30Q9C005 99 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 PTPRDP23468 1912 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 GREB1Q4ZG55 1949 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 KRT87PA6NCN2 255 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 ANKRD66B4E2M5 251 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 CXCR6O00574 342 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 SERPINA1P01009 418 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 PORP16435 677 aaPredicted RBP20.6■□□□□ 0.89
COL23A1-201ENST00000390654 TGFBR1P36897 503 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 PHKG1Q16816 387 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 PRSS55Q6UWB4 352 aaPredicted RBP20.6■□□□□ 0.89
COL23A1-201ENST00000390654 RNF19BQ6ZMZ0 732 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 EFL1Q7Z2Z2 1120 aaKnown RBP20.6■□□□□ 0.89
COL23A1-201ENST00000390654 GTF2H4Q92759 462 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 TM6SF2Q9BZW4 377 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 ELOVL2Q9NXB9 296 aa20.6■□□□□ 0.89
COL23A1-201ENST00000390654 ANKRD28O15084 1053 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 FFAR2O15552 330 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 TULP3O75386 442 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 CDH3P22223 829 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 TTPAP49638 278 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 GRSF1Q12849 480 aaKnown RBP eCLIP20.59■□□□□ 0.89
COL23A1-201ENST00000390654 SAPCD2Q86UD0 394 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 NETO1Q8TDF5 533 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 PSKH2Q96QS6 385 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 POLE4Q9NR33 117 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 LOC100130705A0A1B0GUX0 176 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 MYO1GB0I1T2 1018 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 DNASE1L3Q13609 305 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 CPSF6Q16630 551 aaKnown RBP eCLIP20.59■□□□□ 0.89
COL23A1-201ENST00000390654 TTC23Q5W5X9 447 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 MSRB3Q8IXL7 192 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 RNF168Q8IYW5 571 aaPredicted RBP20.59■□□□□ 0.89
COL23A1-201ENST00000390654 DPP10Q8N608 796 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 OR52E6Q96RD3 313 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 OSBPL10Q9BXB5 764 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 UGT2B28Q9BY64 529 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 PNMA8BQ9ULN7 279 aaPredicted RBP20.59■□□□□ 0.89
COL23A1-201ENST00000390654 ELOVL7A1L3X0 281 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 KLK8O60259 260 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 ZNF682O95780 498 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 ZNF12P17014 697 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 GKP32189 559 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 PRKCZQ05513 592 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 GRIK2Q13002 908 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 DSC3Q14574 896 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 SKIV2LQ15477 1246 aaKnown RBP20.59■□□□□ 0.89
COL23A1-201ENST00000390654 TMEM236Q5W0B7 351 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 SLCO6A1Q86UG4 719 aa20.59■□□□□ 0.89
COL23A1-201ENST00000390654 TERB1Q8NA31 727 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms