RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PTGIRP43119 386 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 PPM1FP49593 454 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 TTPAP49638 278 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 CXADRP78310 365 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 SH3BP2P78314 561 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 SARNPP82979 210 aaKnown RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 PLOD1Q02809 727 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 IL11RAQ14626 422 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 TYSND1Q2T9J0 566 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 CACHD1Q5VU97 1274 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 KIAA0930Q6ICG6 404 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 IRGCQ6NXR0 463 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 CES3Q6UWW8 571 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 FAM92BQ6ZTR7 304 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 TIPARPQ7Z3E1 657 aaKnown RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 LDB1Q86U70 411 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 TMEM135Q86UB9 458 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 KMT5CQ86Y97 462 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 AGGF1Q8N302 714 aaeCLIP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 LSM14AQ8ND56 463 aaKnown RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 PHC3Q8NDX5 983 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 LKAAEAR1Q8TD35 194 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 ANP32BQ92688 251 aaKnown RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 SIGLEC10Q96LC7 697 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 UBL7Q96S82 380 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 NRTNQ99748 197 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 MAP3K3Q99759 626 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 CTRCQ99895 268 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 ZMYND15Q9H091 742 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 KCND1Q9NSA2 647 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 MED13Q9UHV7 2174 aa11.08□□□□□ -0.64
IGHV4-28-201ENST00000390612 MDC1Q14676 2089 aaKnown RBP11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 FAM237BA0A1B0GVD1 139 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 MAGEB16A2A368 324 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 OR6C74A6NCV1 312 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 F8W8V4 182 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 IFRD1O00458 451 aaPredicted RBP11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 BTN3A3O00478 584 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 POLR1CO15160 346 aaPredicted RBP11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 SLCO2B1O94956 709 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 VAPBO95292 243 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 AOAHP28039 575 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 SEPHS1P49903 392 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 KPNA2P52292 529 aaKnown RBP11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 ADARP55265 1226 aaKnown RBP11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 MAP7Q14244 749 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 GSE1Q14687 1217 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 PLCL1Q15111 1095 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 RNASEH2BQ5TBB1 312 aaKnown RBP11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 ARHGAP40Q5TG30 622 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 ZNF449Q6P9G9 518 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 NAPRTQ6XQN6 538 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 CCDC81Q6ZN84 652 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 OOSP2Q86WS3 158 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 VRK3Q8IV63 474 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 TBC1D21Q8IYX1 336 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 SLC22A15Q8IZD6 547 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 ADGRF3Q8IZF5 1079 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 D2HGDHQ8N465 521 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 OR4E2Q8NGC2 313 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 OR52E1Q8NGJ3 308 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 GRK7Q8WTQ7 553 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 LCN9Q8WX39 176 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 ELMO1Q92556 727 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 TTC9Q92623 222 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 WBP1Q96G27 269 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 BIRC8Q96P09 236 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 SERPINB12Q96P63 405 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 FERD3LQ96RJ6 166 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 TCF12Q99081 682 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 XAB2Q9HCS7 855 aaKnown RBP11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 POMT2Q9UKY4 750 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 BTRCQ9Y297 605 aa11.07□□□□□ -0.64
IGHV4-28-201ENST00000390612 ZNF462Q96JM2 2506 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 GOLGA6L10A0A0M3HER8 536 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 ZCWPW2A0A1B0GU75 182 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 SDR42E2A6NKP2 422 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 IQCF5A8MTL0 148 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 ATXN7O15265 892 aaPredicted RBP11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 RAD1O60671 282 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 RASSF9O75901 435 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 STK17BO94768 372 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 MSL3P1P0C860 447 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 FOLR1P15328 257 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 GNG11P61952 73 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 RHDQ02161 417 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 PTK6Q13882 451 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 GBX1Q14549 363 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 ANKRD20A4Q4UJ75 823 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 DNAJC21Q5F1R6 531 aaKnown RBP11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 MANEAQ5SRI9 462 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 CENPUQ71F23 418 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 VASH2Q86V25 355 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 BPHLQ86WA6 291 aaPredicted RBP11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 LRRC6Q86X45 466 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 OR5AR1Q8NGP9 310 aa11.06□□□□□ -0.64
IGHV4-28-201ENST00000390612 OR5K2Q8NHB8 316 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms