RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 KCNC2Q96PR1 638 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 YME1L1Q96TA2 773 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 SP140LQ9H930 580 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 TCRBV3S1A0A5B6 114 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 KPNA6O60684 536 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 CREG1O75629 220 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 TRBC1P01850 177 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 DDX5P17844 614 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 EPORP19235 508 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 MAGEA10P43363 369 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 NCS1P62166 190 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 CREB5Q02930 508 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 TIGD5Q53EQ6 642 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 NOL9Q5SY16 702 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 CES4AQ5XG92 561 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 NEK5Q6P3R8 708 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 LRCH3Q96II8 777 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 AARSD1Q9BTE6 412 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 OSBPL2Q9H1P3 480 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 CLEC4MQ9H2X3 399 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 SNTG1Q9NSN8 517 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 CDV3Q9UKY7 258 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 FAM240BA0A1B0GVZ2 78 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 CCRL2O00421 344 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 AP1G1O43747 822 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 BCAS1O75363 584 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 HSD17B1P14061 328 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARSDP51689 593 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ITGA1P56199 1179 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARHGAP1Q07960 439 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 PTGR1Q14914 329 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 PARP15Q460N3 678 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 HOMEZQ8IX15 550 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 COLGALT2Q8IYK4 626 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 GMLQ99445 158 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ADAM30Q9UKF2 790 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ACOT8O14734 319 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 USP2O75604 605 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 PSMA1P25786 263 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 DPP6P42658 865 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 DGKEP52429 567 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 MRPS6P82932 125 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZZZ3Q8IYH5 903 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ADGRG5Q8IZF4 528 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR4F6Q8NGB9 312 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 TCF25Q9BQ70 676 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 CRTAC1Q9NQ79 661 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 FAM118AQ9NWS6 357 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARIH1Q9Y4X5 557 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 HAT1O14929 419 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 KPNA5O15131 536 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 PSIP1O75475 530 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 CLDN9O95484 217 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 GSTT2P0CG29 244 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 GSTT2BP0CG30 244 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 FOXA1P55317 472 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR2T5Q6IEZ7 315 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 HACD2Q6Y1H2 254 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 UBE2R2Q712K3 238 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 HS3ST5Q8IZT8 346 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR2T29Q8NH02 315 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 KIAA1191Q96A73 305 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 MRGPRX2Q96LB1 330 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 C3orf30Q96M34 536 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 GFM1Q96RP9 751 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 CITO14578 2027 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 PLK4O00444 970 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 PER2O15055 1255 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ITGA2P17301 1181 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 LEPRP48357 1165 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 PTPN5P54829 565 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 RPS3AP61247 264 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 USP39Q53GS9 565 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 CES5AQ6NT32 575 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 RNF111Q6ZNA4 994 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 SUN5Q8TC36 379 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 GANCQ8TET4 914 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
TRAPPC9-201ENST00000389328 NOTOA8MTQ0 251 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 FFAR2O15552 330 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 OXSR1O95747 527 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 CHRNA1P02708 482 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ALDH2P05091 517 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 PGRP06401 933 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 C7P10643 843 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 CD1DP15813 335 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 MAGEA3P43357 314 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ABRQ12979 859 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 PAGE3Q5JUK9 113 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ANKRD26P1Q6NSI1 321 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 ANKRD13BQ86YJ7 626 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 LGALS12Q96DT0 336 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 HS3ST4Q9Y661 456 aa12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-201ENST00000389328 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms