RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 HSMCR30P0CW71 290 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 TRAPPC2P0DI81 140 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 TRAPPC2BP0DI82 140 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 GGT1P19440 569 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 CAPSQ13938 189 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 DPP9Q86TI2 863 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 SYVN1Q86TM6 617 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 SETD9Q8NE22 299 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 RDM1Q8NG50 284 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 OR5K1Q8NHB7 308 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 SH3RF2Q8TEC5 729 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 MARC2Q969Z3 335 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 COQ8BQ96D53 544 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 ZC4H2Q9NQZ6 224 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 ZNF224Q9NZL3 707 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 TMX2Q9Y320 296 aa20.65■□□□□ 0.9
NKX3-2-201ENST00000382438 CXCL8P10145 99 aa20.64■□□□□ 0.9
NKX3-2-201ENST00000382438 COQ5Q5HYK3 327 aa20.64■□□□□ 0.9
NKX3-2-201ENST00000382438 OR8H3Q8N146 312 aa20.64■□□□□ 0.9
NKX3-2-201ENST00000382438 PDCD2LQ9BRP1 358 aa20.64■□□□□ 0.9
NKX3-2-201ENST00000382438 SMPD4Q9NXE4 827 aa20.64■□□□□ 0.9
NKX3-2-201ENST00000382438 VNN3Q9NY84 501 aa20.64■□□□□ 0.9
NKX3-2-201ENST00000382438 NUP205Q92621 2012 aa20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 SLC22A3O75751 556 aa20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 NFICP08651 508 aa20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 CSTF2P33240 577 aaKnown RBP eCLIP20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 KBTBD8Q8NFY9 601 aa20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 RNF139Q8WU17 664 aa20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 NDRG1Q92597 394 aaKnown RBP20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 KIFC1Q9BW19 673 aa20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 MCCC2Q9HCC0 563 aa20.64■□□□□ 0.89
NKX3-2-201ENST00000382438 PIK3CBP42338 1070 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 RPS5P46782 204 aaKnown RBP20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 ARMCX4Q5H9R4 360 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 GPR158Q5T848 1215 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 PHC2Q8IXK0 858 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 TBATAQ96M53 351 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 DPEP3Q9H4B8 488 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 B3GNT2Q9NY97 397 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 KCNE2Q9Y6J6 123 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 DNMT3AQ9Y6K1 912 aaPredicted RBP20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 LCP1P13796 627 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 PITX1P78337 314 aaPredicted RBP20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 BNC1Q01954 994 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 IL18R1Q13478 541 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 KIAA1324Q6UXG2 1013 aaKnown RBP20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 ANKS3Q6ZW76 656 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 SLC22A9Q8IVM8 553 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 OR52K2Q8NGK3 314 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 GIMAP1Q8WWP7 306 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 ISG20Q96AZ6 181 aaKnown RBP20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 LIN7BQ9HAP6 207 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 NOS2P35228 1153 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 SMARCB1Q12824 385 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 SETMARQ53H47 684 aaPredicted RBP20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 LCLAT1Q6UWP7 414 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 CREB3L2Q70SY1 520 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 LRRC8DQ7L1W4 858 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 GLCCI1Q86VQ1 547 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 ADHFE1Q8IWW8 467 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 SPATA22Q8NHS9 363 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 GPR151Q8TDV0 419 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 RHBDF1Q96CC6 855 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 CYP3A43Q9HB55 503 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 WASH6PQ9NQA3 447 aa20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 CCDC59Q9P031 241 aaKnown RBP20.63■□□□□ 0.89
NKX3-2-201ENST00000382438 B4DXG7 233 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 ZNF30P17039 623 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 TNNI3P19429 210 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 TALDO1P37837 337 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 CDH17Q12864 832 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 HYAL2Q12891 473 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 FOXD4Q12950 439 aaPredicted RBP20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 MAD2L1BPQ15013 274 aaPredicted RBP20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 CLVS2Q5SYC1 327 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 SHEQ5VZ18 495 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 FAM171BQ6P995 826 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 SLC46A3Q7Z3Q1 461 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 TMC8Q8IU68 726 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 PTGR2Q8N8N7 351 aaPredicted RBP20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 OR10A6Q8NH74 314 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 DNASE1L2Q92874 299 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 FAM162AQ96A26 154 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 FRMD6Q96NE9 622 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 MCCC1Q96RQ3 725 aaPredicted RBP20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 FAM83DQ9H4H8 585 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 SCML1Q9UN30 329 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 GABRQQ9UN88 632 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 ABCA3Q99758 1704 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 KIAA0513O60268 411 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 ICAM1P05362 532 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 ARL2P36404 184 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 TNK1Q13470 666 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 ARSKQ6UWY0 536 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 CPA6Q8N4T0 437 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 ZNF583Q96ND8 569 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 UQCC2Q9BRT2 126 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 COPS4Q9BT78 406 aa20.62■□□□□ 0.89
NKX3-2-201ENST00000382438 ABCB8Q9NUT2 735 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms