RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 ZNF658BQ4V348 819 aaPredicted RBP16.38■□□□□ 0.21
SMN2-201ENST00000380741 IZUMO3Q5VZ72 239 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 LCN10Q6JVE6 187 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 KLHDC8BQ8IXV7 354 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 DSELQ8IZU8 1212 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 CALR3Q96L12 384 aaKnown RBP16.38■□□□□ 0.21
SMN2-201ENST00000380741 LRFN5Q96NI6 719 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 FERD3LQ96RJ6 166 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 FANCEQ9HB96 536 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 C1GALT1Q9NS00 363 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 ZDHHC3Q9NYG2 299 aa16.38■□□□□ 0.21
SMN2-201ENST00000380741 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
SMN2-201ENST00000380741 FARSAQ9Y285 508 aaKnown RBP16.38■□□□□ 0.21
SMN2-201ENST00000380741 REXO2Q9Y3B8 237 aaKnown RBP16.38■□□□□ 0.21
SMN2-201ENST00000380741 RP1L1Q8IWN7 2480 aaPredicted RBP16.38■□□□□ 0.21
SMN2-201ENST00000380741 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 ARGFXA6NJG6 315 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 TMEM150CB9EJG8 249 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 MEN1O00255 615 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 MATN2O00339 956 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 BTN3A3O00478 584 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 BTN3A1O00481 513 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 KLK3P07288 261 aaPredicted RBP16.37■□□□□ 0.21
SMN2-201ENST00000380741 PDHA2P29803 388 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 PRDX3P30048 256 aaKnown RBP16.37■□□□□ 0.21
SMN2-201ENST00000380741 GSDMDP57764 484 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 ZRANB3Q5FWF4 1079 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 ZNF789Q5FWF6 425 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 PLEKHS1Q5SXH7 462 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 KCTD11Q693B1 232 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 SERPINA9Q86WD7 417 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 ENDOVQ8N8Q3 282 aaKnown RBP16.37■□□□□ 0.21
SMN2-201ENST00000380741 LRRC57Q8N9N7 239 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 OR52E1Q8NGJ3 308 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 OR1L3Q8NH93 324 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 CPT1BQ92523 772 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 PANX2Q96RD6 677 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 LACRTQ9GZZ8 138 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 VPS37BQ9H9H4 285 aa16.37■□□□□ 0.21
SMN2-201ENST00000380741 PRRC2CQ9Y520 2896 aaKnown RBP16.37■□□□□ 0.21
SMN2-201ENST00000380741 UTP20O75691 2785 aaKnown RBP16.37■□□□□ 0.21
SMN2-201ENST00000380741 FER1L5A0AVI2 2057 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 SPTAN1Q13813 2472 aaKnown RBP16.36■□□□□ 0.21
SMN2-201ENST00000380741 BTNL10A8MVZ5 291 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 H7C0S8 307 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
SMN2-201ENST00000380741 ST6GAL1P15907 406 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 TPH1P17752 444 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 RORAP35398 523 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 CETN2P41208 172 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 PTGIRP43119 386 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 PREPP48147 710 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 CD151P48509 253 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 FAM69BQ5VUD6 431 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 ARHGEF18Q6ZSZ5 1173 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 ATCAYQ86WG3 371 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 TMTC1Q8IUR5 882 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 CLDN19Q8N6F1 224 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 PHC3Q8NDX5 983 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 ADAMTS17Q8TE56 1095 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 LRRC45Q96CN5 670 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 CLIP3Q96DZ5 547 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 HGH1Q9BTY7 390 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 SLC25A23Q9BV35 468 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 PITPNM3Q9BZ71 974 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 ING2Q9H160 280 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 TFB2MQ9H5Q4 396 aaKnown RBP16.36■□□□□ 0.21
SMN2-201ENST00000380741 ACSS2Q9NR19 701 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 PCMTD2Q9NV79 361 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 NLE1Q9NVX2 485 aaPredicted RBP16.36■□□□□ 0.21
SMN2-201ENST00000380741 SNX7Q9UNH6 387 aa16.36■□□□□ 0.21
SMN2-201ENST00000380741 GRID2IPA4D2P6 1211 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
SMN2-201ENST00000380741 METTL18O95568 372 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 RAB40ALP0C0E4 278 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 MSL3P1P0C860 447 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 PVRP15151 417 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 LMAN1P49257 510 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 CCL11P51671 97 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 PGDP52209 483 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 BOP1Q14137 746 aaKnown RBP16.35■□□□□ 0.21
SMN2-201ENST00000380741 POU6F1Q14863 301 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 PARP6Q2NL67 630 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 RAD9BQ6WBX8 426 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 TAS2R42Q7RTR8 314 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 AMIGO1Q86WK6 493 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 PIANPQ8IYJ0 282 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 SYTL1Q8IYJ3 562 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 FAM26EQ8N5C1 309 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 FAM71DQ8N9W8 422 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 ACRBPQ8NEB7 543 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 TRAPPC9Q96Q05 1148 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 NLNQ9BYT8 704 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 KLHL25Q9H0H3 589 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 XKR8Q9H6D3 395 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 MVB12BQ9H7P6 319 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 LRRC40Q9H9A6 602 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 ACTR5Q9H9F9 607 aaPredicted RBP16.35■□□□□ 0.21
SMN2-201ENST00000380741 SYTL2Q9HCH5 934 aa16.35■□□□□ 0.21
SMN2-201ENST00000380741 MLXIPLQ9NP71 852 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms