RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DNAJA2O60884 412 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ULK1O75385 1050 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 MOSPD3O75425 235 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 RFPL2O75678 378 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 STK16O75716 305 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 C8GP07360 202 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 HIST1H2AGP0C0S8 130 aaPredicted RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 BMP1P13497 986 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 TCF3P15923 654 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 HIST1H2ADP20671 130 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 GRIA3P42263 894 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 RPIAP49247 311 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 CLCN2P51788 898 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 CDKL1Q00532 357 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 UBE3AQ05086 875 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ZNF77Q15935 545 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 AP5B1Q2VPB7 878 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 AASDHQ4L235 1098 aaPredicted RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 LY6G5CQ5SRR4 150 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 LCN8Q6JVE9 175 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ADIPOR2Q86V24 386 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ZFAND4Q86XD8 727 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 GALNT13Q8IUC8 556 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ADGRG2Q8IZP9 1017 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 OR2A12Q8NGT7 310 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 NAT14Q8WUY8 206 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 VPS33AQ96AX1 596 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 HIST1H2AHQ96KK5 128 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 TEX37Q96LM6 180 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 UHRF1Q96T88 793 aaPredicted RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 HIST1H2AJQ99878 128 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 H2AFJQ9BTM1 129 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 CMTM6Q9NX76 183 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ERVW-1Q9UQF0 538 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 EIF3LQ9Y262 564 aaKnown RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 C9JVG2 144 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 C1SP09871 688 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 ATP1B2P14415 290 aaPredicted RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 IL10P22301 178 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 ZFP36L2P47974 494 aaKnown RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 CHN2P52757 468 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 SEMG2Q02383 582 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 GRM2Q14416 872 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 CAPRIN1Q14444 709 aaKnown RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 NCSTNQ92542 709 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 PPWD1Q96BP3 646 aaKnown RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 TMEM79Q9BSE2 394 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 SPATA16Q9BXB7 569 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 SMOXQ9NWM0 555 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 MARK1Q9P0L2 795 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 SNX13Q9Y5W8 968 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 KANSL1LA0AUZ9 987 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 ZNF197O14709 1029 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 HNRNPRO43390 633 aaKnown RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 AP1G1O43747 822 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 CSPG5O95196 566 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 MPC1LP0DKB6 136 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 PSMA4P25789 261 aaKnown RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 AOAHP28039 575 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 HTR6P50406 440 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 EEFSECP57772 596 aaKnown RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 TLR1Q15399 786 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 PLEKHS1Q5SXH7 462 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 CYP20A1Q6UW02 462 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 DPP10Q8N608 796 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 CHST14Q8NCH0 376 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 DNAJB14Q8TBM8 379 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 SPPL3Q8TCT6 385 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 LZICQ8WZA0 190 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 TMEM125Q96AQ2 219 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 SLC29A3Q9BZD2 475 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 LINC00597Q9H2U6 94 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 ALG2Q9H553 416 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 SLC32A1Q9H598 525 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 CCM2LQ9NUG4 571 aaPredicted RBP12.37□□□□□ -0.43
VPS16-202ENST00000380445 ARL15Q9NXU5 204 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 DPP7Q9UHL4 492 aa12.37□□□□□ -0.43
VPS16-202ENST00000380445 ARNTLO00327 626 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 TLL1O43897 1013 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 ZNF24P17028 368 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 JAK1P23458 1154 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 AKT1P31749 480 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 VIPR1P32241 457 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 CCR7P32248 378 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 GGT5P36269 586 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 HNMTP50135 292 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 DCDC1P59894 354 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 B4GALNT1Q00973 533 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 FPGSQ05932 587 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 IMPG1Q17R60 797 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 TIGD2Q4W5G0 525 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 FBXL19Q6PCT2 694 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 PTRH1Q86Y79 214 aaKnown RBP12.36□□□□□ -0.43
VPS16-202ENST00000380445 LRTOMTQ8WZ04 291 aa12.36□□□□□ -0.43
VPS16-202ENST00000380445 SLCO4A1Q96BD0 722 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms