RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 HIST1H2AJQ99878 128 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 H2AFJQ9BTM1 129 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 SLC32A1Q9H598 525 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 SLC28A3Q9HAS3 691 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 DUS2Q9NX74 493 aaKnown RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 A6NHS1 94 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 TTC34A8MYJ7 566 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 PSMD11O00231 422 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 SMNDC1O75940 238 aaKnown RBP eCLIP22.65■■□□□ 1.22
VPS16-201ENST00000380443 FTH1P02794 183 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 ADH5P11766 374 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 AKT1P31749 480 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 HSPA13P48723 471 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 AP1S2P56377 157 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 ST8SIA6P61647 398 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 SEMG2Q02383 582 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 NR6A1Q15406 480 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 GRAMD1BQ3KR37 738 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 SFT2D3Q587I9 215 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 FAM219BQ5XKK7 198 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 ZFAND4Q86XD8 727 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 SLC15A3Q8IY34 581 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 DPP10Q8N608 796 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 DDHD1Q8NEL9 900 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 ASB11Q8WXH4 323 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 FAM83CQ9BQN1 747 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 Q9H521 79 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 PCDH12Q9NPG4 1184 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 ASIC5Q9NY37 505 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 TMPRSS11EQ9UL52 423 aa22.65■■□□□ 1.22
VPS16-201ENST00000380443 VGLL3A8MV65 326 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 H0YJX3 145 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 FXYD1O00168 92 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 ARNTLO00327 626 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 CSPG5O95196 566 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 CYP17A1P05093 508 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 SLC6A2P23975 617 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 MAPK9P45984 424 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 ZFP36L2P47974 494 aaKnown RBP22.64■■□□□ 1.22
VPS16-201ENST00000380443 UFM1P61960 85 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 MED21Q13503 144 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 C6orf10Q5SRN2 563 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 LDLRAP1Q5SW96 308 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 SCIMPQ6UWF3 145 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 UBE2R2Q712K3 238 aaPredicted RBP22.64■■□□□ 1.22
VPS16-201ENST00000380443 NAT16Q8N8M0 369 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 FAM156AQ8NDB6 213 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 VPS35Q96QK1 796 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 PCDHAC1Q9H158 963 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 PIDD1Q9HB75 910 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 TSR3Q9UJK0 312 aaKnown RBP22.64■■□□□ 1.22
VPS16-201ENST00000380443 EIF3LQ9Y262 564 aaKnown RBP22.64■■□□□ 1.22
VPS16-201ENST00000380443 PCDHA9Q9Y5H5 950 aa22.64■■□□□ 1.22
VPS16-201ENST00000380443 NME4O00746 187 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 ULK1O75385 1050 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 CYP2A7P20853 494 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 JAK1P23458 1154 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 CLCN2P51788 898 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 EEFSECP57772 596 aaKnown RBP22.64■■□□□ 1.21
VPS16-201ENST00000380443 RALGDSQ12967 914 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 NFYCQ13952 458 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 TLR1Q15399 786 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 AP5B1Q2VPB7 878 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 ZNF284Q2VY69 593 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 GGTA1PQ4G0N0 100 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 ZNF697Q5TEC3 545 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 ERAP2Q6P179 960 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 RFLNAQ6ZTI6 216 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 TICAM1Q8IUC6 712 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 OR2T34Q8NGX1 318 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 OR2T3Q8NH03 318 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 PROKR1Q8TCW9 393 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 CYB5D2Q8WUJ1 264 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 UHRF1Q96T88 793 aaPredicted RBP22.64■■□□□ 1.21
VPS16-201ENST00000380443 COPS7BQ9H9Q2 264 aaPredicted RBP22.64■■□□□ 1.21
VPS16-201ENST00000380443 ARL15Q9NXU5 204 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 PDE10AQ9Y233 779 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 YBX2Q9Y2T7 364 aaKnown RBP22.64■■□□□ 1.21
VPS16-201ENST00000380443 CCL27Q9Y4X3 112 aa22.64■■□□□ 1.21
VPS16-201ENST00000380443 PIKFYVEQ9Y2I7 2098 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 GFYI3L273 518 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 DNAJA2O60884 412 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 CLDN9O95484 217 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 KRT6AP02538 564 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 KRT6BP04259 564 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 CA3P07451 260 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 MYOGP15173 224 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 KRT6CP48668 564 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 KCNC3Q14003 757 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 ABRAXAS2Q15018 415 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 LRRC36Q1X8D7 754 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 HENMT1Q5T8I9 393 aaKnown RBP22.63■■□□□ 1.21
VPS16-201ENST00000380443 HSD11B1LQ7Z5J1 315 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 ASZ1Q8WWH4 475 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 MYCBPQ99417 103 aaPredicted RBP22.63■■□□□ 1.21
VPS16-201ENST00000380443 NKX2-4Q9H2Z4 354 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 ACTR3BQ9P1U1 418 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 RAB26Q9ULW5 256 aa22.63■■□□□ 1.21
VPS16-201ENST00000380443 NUP210Q8TEM1 1887 aaPredicted RBP22.63■■□□□ 1.21
VPS16-201ENST00000380443 HTR6P50406 440 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms