RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PBLDP30039 288 aaPredicted RBP16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 GGT5P36269 586 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 MXRA7P84157 204 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 SLC25A3Q00325 362 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 GRB7Q14451 532 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 WSCD2Q2TBF2 565 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 SYTL3Q4VX76 610 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 METTL2BQ6P1Q9 378 aaKnown RBP16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 PNCKQ6P2M8 343 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 ZNF547Q8IVP9 402 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 TMEM159Q96B96 161 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 COX14Q96I36 57 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 HIC2Q96JB3 615 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 ZFR2Q9UPR6 939 aaKnown RBP16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
THUMPD2-201ENST00000378727 K7EPI3 171 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 STK16O75716 305 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 OTCP00480 354 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 GSTM1P09488 218 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 THRAP10827 490 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 ZNF8P17098 575 aaPredicted RBP16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 PDHA2P29803 388 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 GSTM4Q03013 218 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 ABRQ12979 859 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 CDC16Q13042 620 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 STARD3Q14849 445 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 XKR7Q5GH72 579 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 SDE2Q6IQ49 451 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 ADAMTSL4Q6UY14 1074 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 PARP9Q8IXQ6 854 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 RP9Q8TA86 221 aaKnown RBP16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 KCNV2Q8TDN2 545 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 FOXJ1Q92949 421 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 MCUR1Q96AQ8 359 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 FAM131CQ96AQ9 280 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 TRIM54Q9BYV2 358 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 PCYT1BQ9Y5K3 369 aaPredicted RBP16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 NUMA1Q14980 2115 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 MBTPS2O43462 519 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 KATNA1O75449 491 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 PSIP1O75475 530 aaKnown RBP16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 PCCBP05166 539 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 CAPN1P07384 714 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 HIST1H2AGP0C0S8 130 aaPredicted RBP16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 HOXB2P14652 356 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 HIST1H2ADP20671 130 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 PGM1P36871 562 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 RIPK1Q13546 671 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 PTK2BQ14289 1009 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 FGL2Q14314 439 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 SQLEQ14534 574 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 HERC3Q15034 1050 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 DNAL1Q4LDG9 190 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 SCIMPQ6UWF3 145 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 TRAPPC5Q8IUR0 188 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 SLC22A15Q8IZD6 547 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 OR2T11Q8NH01 316 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 ATP6V1E2Q96A05 226 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 HIST1H2AHQ96KK5 128 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 HIST1H2AJQ99878 128 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 RTKNQ9BST9 563 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 H2AFJQ9BTM1 129 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 FBXL12Q9NXK8 326 aa16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.97■□□□□ 0.31
THUMPD2-201ENST00000378727 ARHGEF33A8MVX0 844 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 PRR35P0CG20 571 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 EPORP19235 508 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 CYP2A7P20853 494 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 ARL1P40616 181 aaPredicted RBP16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 HTR6P50406 440 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 CCNG1P51959 295 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 CUL3Q13618 768 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 AGERQ15109 404 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 EFL1Q7Z2Z2 1120 aaKnown RBP16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 HEATR4Q86WZ0 1026 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 CFAP61Q8NHU2 1237 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 MCOLN3Q8TDD5 553 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 TUBGCP3Q96CW5 907 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 MMADHCQ9H3L0 296 aaPredicted RBP16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 C8orf33Q9H7E9 229 aaPredicted RBP16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 MBNL1Q9NR56 388 aaKnown RBP16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 TMEM98Q9Y2Y6 226 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 ANGPTL3Q9Y5C1 460 aa16.96■□□□□ 0.31
THUMPD2-201ENST00000378727 SHISA7A6NL88 538 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 VEGFDO43915 354 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 ATP6V1G2O95670 118 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 CHEK2O96017 543 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 ASGR2P07307 311 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 ITGAXP20702 1163 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 DRD1P21728 446 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 SLC6A12P48065 614 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 AP1S2P56377 157 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 CDK3Q00526 305 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 GRSF1Q12849 480 aaKnown RBP eCLIP16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 SMAD4Q13485 552 aaKnown RBP16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 CYLC2Q14093 348 aaPredicted RBP16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 MILR1Q7Z6M3 343 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 TCAIMQ8N3R3 496 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 SNX31Q8N9S9 440 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms