RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 RHOJQ9H4E5 214 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 KIR3DX1Q9H7L2 352 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 TAS2R13Q9NYV9 303 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 MT-CO3P00414 261 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 ADRB1P08588 477 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 MYBL2P10244 700 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 CDKN2DP55273 166 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 ACSBG2Q5FVE4 666 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 HECTD2Q5U5R9 776 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 FAM45BPQ6NSW5 357 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 DUS1LQ6P1R4 473 aaKnown RBP18.27■□□□□ 0.52
SSU72-203ENST00000378725 TRMT10CQ7L0Y3 403 aaKnown RBP18.27■□□□□ 0.52
SSU72-203ENST00000378725 TBC1D21Q8IYX1 336 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 GALNT15Q8N3T1 639 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 FAM45AQ8TCE6 357 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 CD200R1Q8TD46 325 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 TBC1D10AQ9BXI6 508 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 EPB41L1Q9H4G0 881 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 SLC24A2Q9UI40 661 aa18.27■□□□□ 0.52
SSU72-203ENST00000378725 DCHS1Q96JQ0 3298 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 FAM221BA6H8Z2 402 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 MATN4O95460 622 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 CBSLP0DN79 551 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 FDXRP22570 491 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 CBSP35520 551 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 GP5P40197 560 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 CFHR1Q03591 330 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 ABRQ12979 859 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 KRT33BQ14525 404 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 TTLL9Q3SXZ7 439 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 GRTP1Q5TC63 336 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 HES3Q5TGS1 186 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 UNC5DQ6UXZ4 953 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 CYHR1Q6ZMK1 362 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 NEK10Q6ZWH5 1172 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 CTAGE3PQ8IX95 158 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 DCBLD1Q8N8Z6 715 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 GPATCH11Q8N954 259 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 ACVR1CQ8NER5 493 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 OR10G6Q8NH81 332 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 UBXN4Q92575 508 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 GFM1Q96RP9 751 aaKnown RBP18.26■□□□□ 0.51
SSU72-203ENST00000378725 CYTH2Q99418 400 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 ACSS3Q9H6R3 686 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 OGFRQ9NZT2 677 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 ASF1AQ9Y294 204 aa18.26■□□□□ 0.51
SSU72-203ENST00000378725 EIF3FO00303 357 aaPredicted RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 ACSL3O95573 720 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 CPNE6O95741 557 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 PMS2P54278 862 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 SPIDRQ14159 915 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 AMZ1Q400G9 498 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 NKAIN2Q5VXU1 208 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 WDR93Q6P2C0 686 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 WDR74Q6RFH5 385 aaPredicted RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 RBM44Q6ZP01 1051 aaKnown RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 USP53Q70EK8 1073 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 GSPT2Q8IYD1 628 aaKnown RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 PPM1NQ8N819 430 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 OR5AR1Q8NGP9 310 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 OR5K2Q8NHB8 316 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 VPS39Q96JC1 886 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 RBBP8Q99708 897 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 OLFM1Q99784 485 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 DPYSL5Q9BPU6 564 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 TRIT1Q9H3H1 467 aaKnown RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 TFB2MQ9H5Q4 396 aaKnown RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 TXNDC16Q9P2K2 825 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 POLG2Q9UHN1 485 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 TRMT6Q9UJA5 497 aaKnown RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 ATXN7L1Q9ULK2 861 aaPredicted RBP18.25■□□□□ 0.51
SSU72-203ENST00000378725 CLCA2Q9UQC9 943 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 PIKFYVEQ9Y2I7 2098 aa18.25■□□□□ 0.51
SSU72-203ENST00000378725 FAM95CA0A1B0GW59 222 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 HYAL3O43820 417 aaPredicted RBP18.24■□□□□ 0.51
SSU72-203ENST00000378725 UBXN7O94888 489 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 TOP3BO95985 862 aaKnown RBP18.24■□□□□ 0.51
SSU72-203ENST00000378725 ABHD2P08910 425 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 MPC1LP0DKB6 136 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 ENO3P13929 434 aaPredicted RBP18.24■□□□□ 0.51
SSU72-203ENST00000378725 CLDN6P56747 220 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 VSNL1P62760 191 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 ZFP36L1Q07352 338 aaKnown RBP18.24■□□□□ 0.51
SSU72-203ENST00000378725 FOXC1Q12948 553 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 EFTUD2Q15029 972 aaKnown RBP eCLIP18.24■□□□□ 0.51
SSU72-203ENST00000378725 ERCC6LQ2NKX8 1250 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 KLHL38Q2WGJ6 581 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 PAQR3Q6TCH7 311 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 ZNF574Q6ZN55 896 aaPredicted RBP18.24■□□□□ 0.51
SSU72-203ENST00000378725 TMPRSS9Q7Z410 1059 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 PIM3Q86V86 326 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 SPNS2Q8IVW8 549 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 ATXN7L3BQ96GX2 97 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 AHCYL2Q96HN2 611 aaKnown RBP18.24■□□□□ 0.51
SSU72-203ENST00000378725 ELMO2Q96JJ3 720 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 PDP2Q9P2J9 529 aa18.24■□□□□ 0.51
SSU72-203ENST00000378725 MTO1Q9Y2Z2 717 aaKnown RBP18.24■□□□□ 0.51
SSU72-203ENST00000378725 D6RAR5 112 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 RIPK2O43353 540 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 DUX1O43812 170 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms