RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 UNC5DQ6UXZ4 953 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 NAPRTQ6XQN6 538 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 NEK10Q6ZWH5 1172 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 STRA8Q7Z7C7 330 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 TBC1D21Q8IYX1 336 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 ACVR1CQ8NER5 493 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.91□□□□□ -0.34
CKAP2-202ENST00000378034 INPP5DQ92835 1189 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 TMEM74Q96NL1 305 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 TRIT1Q9H3H1 467 aaKnown RBP12.91□□□□□ -0.34
CKAP2-202ENST00000378034 SYNDIG1Q9H7V2 258 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 SLC24A2Q9UI40 661 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 NFU1Q9UMS0 254 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 MED16Q9Y2X0 877 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
CKAP2-202ENST00000378034 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 UBXN7O94888 489 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 CBSLP0DN79 551 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 CBSP35520 551 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 MAPK9P45984 424 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 CSE1LP55060 971 aaKnown RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 KYNUQ16719 465 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 MAP9Q49MG5 647 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 FAM45BPQ6NSW5 357 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 CCNI2Q6ZMN8 369 aaPredicted RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 ZNF761Q86XN6 746 aaPredicted RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 VRK3Q8IV63 474 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 OR4D9Q8NGE8 314 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 OR5K2Q8NHB8 316 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 FAM45AQ8TCE6 357 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 FOPNLQ96NB1 174 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 CPNE1Q99829 537 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 SCNM1Q9BWG6 230 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 TBC1D10AQ9BXI6 508 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 FUT8Q9BYC5 575 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 RAB33BQ9H082 229 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 TFB2MQ9H5Q4 396 aaKnown RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 TXNDC16Q9P2K2 825 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 SLC17A6Q9P2U8 582 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 ASF1AQ9Y294 204 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 PRAMEF33A0A0G2JMD5 474 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 PROS1P07225 676 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 F7P08709 466 aaPredicted RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 ENO3P13929 434 aaPredicted RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 AMD1P17707 334 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 TNFRSF8P28908 595 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 CCKBRP32239 447 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 TARDBPQ13148 414 aaKnown RBP eCLIP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 PLCL1Q15111 1095 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 ISXQ2M1V0 245 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 LRRC8EQ6NSJ5 796 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 DUS1LQ6P1R4 473 aaKnown RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 TMEM71Q6P5X7 295 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 ZC3HC1Q86WB0 502 aaKnown RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 FBF1Q8TES7 1133 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 GPR21Q99679 349 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 MCMBPQ9BTE3 642 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 RHOJQ9H4E5 214 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 SMYD2Q9NRG4 433 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 NINJ2Q9NZG7 142 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 TRMT6Q9UJA5 497 aaKnown RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 ATXN7L1Q9ULK2 861 aaPredicted RBP12.9□□□□□ -0.34
CKAP2-202ENST00000378034 VWA7Q9Y334 891 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 MSRB2Q9Y3D2 182 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 PSAT1Q9Y617 370 aa12.9□□□□□ -0.34
CKAP2-202ENST00000378034 CSO75390 466 aaKnown RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 C1QAP02745 245 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 GP5P40197 560 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 INHBCP55103 352 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 ZFP36L1Q07352 338 aaKnown RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 TRA2AQ13595 282 aaKnown RBP eCLIP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 HECTD2Q5U5R9 776 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 NKAIN2Q5VXU1 208 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 USP53Q70EK8 1073 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 PLXDC1Q8IUK5 500 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 SIDT2Q8NBJ9 832 aaKnown RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 PHC3Q8NDX5 983 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 CD200R1Q8TD46 325 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 CYTH2Q99418 400 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 STRADBQ9C0K7 418 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 CDC42EP4Q9H3Q1 356 aaKnown RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 PDP2Q9P2J9 529 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 GALPQ9UBC7 116 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 EPHA6Q9UF33 1036 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 KLK13Q9UKR3 277 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 UNC13CQ8NB66 2214 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 CXorf49A8MYA2 514 aaPredicted RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 MATN4O95460 622 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 TOP3BO95985 862 aaKnown RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 MPC1LP0DKB6 136 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 FDXRP22570 491 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 CCNFP41002 786 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 CAPZBP47756 277 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 PPM1FP49593 454 aaPredicted RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 LIMK2P53671 638 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 ABRQ12979 859 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 RBM20Q5T481 1227 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms