RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 GABRB2P47870 512 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PGDP52209 483 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 WNT7BP56706 349 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 OGDHQ02218 1023 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 CACNG1Q06432 222 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PPM1JQ5JR12 505 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 NEK5Q6P3R8 708 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 FAM220AQ7Z4H9 259 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 MCFD2Q8NI22 146 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 MAPK15Q8TD08 544 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 MFSD3Q96ES6 412 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 RTKNQ9BST9 563 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 NMUR2Q9GZQ4 415 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 TMEM138Q9NPI0 162 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PNO1Q9NRX1 252 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 RAP2CQ9Y3L5 183 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PCDHB1Q9Y5F3 818 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 MYH3P11055 1940 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 KAT6AQ92794 2004 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 KHNYNO15037 678 aaKnown RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 RRP8O43159 456 aaKnown RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 OR1F1O43749 312 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ITGA2BP08514 1039 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PRKAR1AP10644 381 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ZNF8P17098 575 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 CXCL12P48061 93 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 C5orf22Q49AR2 442 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PDSS1Q5T2R2 415 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ZC3H7AQ8IWR0 971 aaKnown RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ZNF366Q8N895 744 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PTGR2Q8N8N7 351 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 RBM15BQ8NDT2 890 aaKnown RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ADAMTS15Q8TE58 950 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PCBD2Q9H0N5 130 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 DENND2DQ9H6A0 471 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 SIX4Q9UIU6 781 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 CCDC88AQ3V6T2 1871 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 GON4LQ3T8J9 2241 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 STRCP1A6NGW2 1772 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 AP3D1O14617 1153 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 STX11O75558 287 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ADSLP30566 484 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 RPS6KA3P51812 740 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 RPS15P62841 145 aaKnown RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 DSC2Q02487 901 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PON2Q15165 354 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 BTN2A1Q7KYR7 527 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 RASGEF1AQ8N9B8 481 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 SUN5Q8TC36 379 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 RACGAP1Q9H0H5 632 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ADAM7Q9H2U9 754 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 SLC17A6Q9P2U8 582 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PADI2Q9Y2J8 665 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 PKD1L3Q7Z443 1732 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 UBR2Q8IWV8 1755 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 LEFTY2O00292 366 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 HDAC3O15379 428 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ATP6V1G1O75348 118 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 NDST3O95803 873 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 LAPTM5Q13571 262 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 LRRC73Q5JTD7 316 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 EMC10Q5UCC4 262 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 TRIM74Q86UV6 250 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 TRIM73Q86UV7 250 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 CIB1Q99828 191 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 TPSD1Q9BZJ3 242 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 ACSS3Q9H6R3 686 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 MRPS30Q9NP92 439 aaKnown RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 RGS17Q9UGC6 210 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-205ENST00000377670 CIDEBQ9UHD4 219 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 GMEB1Q9Y692 573 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 CLCA3PQ9Y6N3 262 aa10.65□□□□□ -0.7
HIF3A-205ENST00000377670 C5orf60A6NFR6 353 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 FAM170BA6NMN3 283 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 ALOX15BO15296 676 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 INSIG1O15503 277 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 UGT1A1P22309 533 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 ITPKAP23677 461 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 STARP49675 285 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 DAOAP59103 153 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 MED22Q15528 200 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 CLEC20AQ6ZU45 233 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 ZBTB2Q8N680 514 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 OR4K2Q8NGD2 314 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 ZNF514Q96K75 400 aaPredicted RBP10.65□□□□□ -0.71
HIF3A-205ENST00000377670 PRICKLE1Q96MT3 831 aaPredicted RBP10.65□□□□□ -0.71
HIF3A-205ENST00000377670 CCDC59Q9P031 241 aaKnown RBP10.65□□□□□ -0.71
HIF3A-205ENST00000377670 CDH22Q9UJ99 828 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 ANGPT4Q9Y264 503 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 ERGIC3Q9Y282 383 aa10.65□□□□□ -0.71
HIF3A-205ENST00000377670 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
HIF3A-205ENST00000377670 PRMT5O14744 637 aaPredicted RBP10.64□□□□□ -0.71
HIF3A-205ENST00000377670 F2P00734 622 aa10.64□□□□□ -0.71
HIF3A-205ENST00000377670 CDH13P55290 713 aa10.64□□□□□ -0.71
HIF3A-205ENST00000377670 CCNYL2Q5T2Q4 361 aa10.64□□□□□ -0.71
HIF3A-205ENST00000377670 ZNF549Q6P9A3 640 aa10.64□□□□□ -0.71
HIF3A-205ENST00000377670 FAM131AQ6UXB0 335 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms