RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CASD1Q96PB1 797 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 NUSAP1Q9BXS6 441 aaKnown RBP12.69□□□□□ -0.38
USP11-204ENST00000377107 TOR3AQ9H497 397 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 EPB41L1Q9H4G0 881 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 RIBC2Q9H4K1 309 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 IKZF5Q9H5V7 419 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 ZDHHC6Q9H6R6 413 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 LRTM1Q9HBL6 345 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 GLYATL1P3A0A0U1RQE8 302 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 DLGAP1O14490 977 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 OR7A17O14581 309 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 ABCB1P08183 1280 aaPredicted RBP12.69□□□□□ -0.38
USP11-204ENST00000377107 GNPDA1P46926 289 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 ARSFP54793 590 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 PABPC1LQ4VXU2 614 aaKnown RBP12.69□□□□□ -0.38
USP11-204ENST00000377107 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 HM13Q8TCT9 377 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 SLC47A1Q96FL8 570 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 ZNF382Q96SR6 550 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 POPDC3Q9HBV1 291 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 ELOVL2Q9NXB9 296 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 IL17CQ9P0M4 197 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 DHRS7Q9Y394 339 aa12.69□□□□□ -0.38
USP11-204ENST00000377107 TNPO3Q9Y5L0 923 aaKnown RBP12.69□□□□□ -0.38
USP11-204ENST00000377107 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 DGKAP23743 735 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 PBLDP30039 288 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 SHMT2P34897 504 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 SUOXP51687 545 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 NUP107P57740 925 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 EEFSECP57772 596 aaKnown RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 CYP4F3Q08477 520 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ELAVL2Q12926 359 aaKnown RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 SLC36A3Q495N2 470 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ZBED5Q49AG3 693 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ZNF621Q6ZSS3 439 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 DNAJB7Q7Z6W7 309 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 RBFAQ8N0V3 343 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ST13P5Q8NFI4 369 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 IL26Q9NPH9 171 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 HPS4Q9NQG7 708 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 NUDT4Q9NZJ9 180 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 SH3BP1Q9Y3L3 701 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ORC6Q9Y5N6 252 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 SNX5Q9Y5X3 404 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 hCG_2039718K7EN88 272 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 PENKP01210 267 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 IGLV3-27P01718 113 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 FTH1P02794 183 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 HIST1H2AGP0C0S8 130 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 PIM1P11309 404 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 HIST1H2ADP20671 130 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 MYF6P23409 242 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 S100A3P33764 101 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 HNF1BP35680 557 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 RPIAP49247 311 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 INTS11Q5TA45 600 aaKnown RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 ANKRD26P1Q6NSI1 321 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 CXorf57Q6NSI4 855 aaKnown RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 KLHL35Q6PF15 583 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 PATL1Q86TB9 770 aaKnown RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 C8orf59Q8N0T1 100 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 STK40Q8N2I9 435 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ZBTB2Q8N680 514 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 FRS2Q8WU20 508 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 HIST1H2AHQ96KK5 128 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 EGLN2Q96KS0 407 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 HIST1H2AJQ99878 128 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 H2AFJQ9BTM1 129 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ZIM2Q9NZV7 527 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 MAGEL2Q9UJ55 1249 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 GNPTGQ9UJJ9 305 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 CLEC4EQ9ULY5 219 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 TMCO1Q9UM00 188 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ZNF236Q9UL36 1845 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 A0A0J9YVX5 310 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ACOX3O15254 700 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 WDR47O94967 919 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 SERPINA1P01009 418 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 UGT2B4P06133 528 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 PGRP06401 933 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ENO2P09104 434 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 IRF5Q13568 498 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ZNF648Q5T619 568 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 OGFOD2Q6N063 350 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 RETSATQ6NUM9 610 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 GALNT7Q86SF2 657 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ZC3H7AQ8IWR0 971 aaKnown RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 TTC30BQ8N4P2 665 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 TPD52L3Q96J77 140 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 PPP3R2Q96LZ3 170 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 NPLQ9BXD5 320 aaPredicted RBP12.68□□□□□ -0.38
USP11-204ENST00000377107 SEZ6LQ9BYH1 1024 aa12.68□□□□□ -0.38
USP11-204ENST00000377107 ELOVL7A1L3X0 281 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 H3BNC9 293 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 STK16O75716 305 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 CD247P20963 164 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 PAX3P23760 479 aa12.67□□□□□ -0.38
USP11-204ENST00000377107 CLCN7P51798 805 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms